Allow user customisation of columns in bpp
and bcm
tables
#423
Workflow file for this run
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Unit Test COSMIC | |
on: [pull_request] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ['3.9', '3.10'] | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Cache pip | |
uses: actions/cache@v2 | |
with: | |
# This path is specific to Ubuntu | |
path: ~/.cache/pip | |
# Look to see if there is a cache hit for the corresponding requirements file | |
key: ${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }} | |
restore-keys: | | |
${{ runner.os }}-pip- | |
${{ runner.os }}- | |
- name: Install dependencies and package | |
run: | | |
sudo apt-get update | |
sudo apt-get install gfortran swig libhdf5-serial-dev meson python3-dev | |
pip install numpy ninja pytest | |
pip install -r requirements.txt | |
python -m pip install . | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics --exclude docs | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics --exclude docs,versioneer.py,cosmic/_version.py,cosmic/tests,cosmic/*/__init__.py | |
- name: Test with pytest | |
run: | | |
bash ci/compile_benchmark.sh | |
pytest --cov=./src/cosmic --cov-report=xml | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v1 |