SARS-CoV-2_workshop

Day 1 (Monday, March 29th, 2021)

Welcome session and important links:

Slides

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Lead: Fritz Sedlazeck, Todd Treangen Baylor College of Medicine

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Module #1: Sequencing and QC

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Lead: Sara J Javornik Cregeen Baylor College of Medicine

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Module #2: Read mapping and variant calling

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Lead: Fritz J Sedlazeck Baylor College of Medicine

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Day 2 (Tuesday, March 30th, 2021)

Module #3: Reference-guided assembly and low frequency variant calling

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Lead: Todd J Treangen Rice University

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Module #4: Phylogenetic analysis

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Lead: Nídia Trovão Fogarty International Center, NIH

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