Ubuntu 20.04 ApPredict test suite #672
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| name: Ubuntu 20.04 ApPredict test suite | |
| on: | |
| push: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: '0 0 * * *' | |
| workflow_dispatch: | |
| inputs: | |
| chaste_clone_params: | |
| description: "Chaste clone parameters" | |
| default: "--branch develop" | |
| type: "string" | |
| jobs: | |
| build-and-test: | |
| name: Build and test on Ubuntu 20.04 | |
| runs-on: [self-hosted, ubuntu-focal] | |
| env: | |
| CHASTE_TEST_OUTPUT: ${{ github.workspace }}/chaste-test-dir | |
| CC: gcc | |
| CXX: g++ | |
| steps: | |
| - name: set number of processors | |
| run: | | |
| echo "NPROC=$(( $(nproc) < 12 ? $(nproc) : 12 ))" >> $GITHUB_ENV | |
| - name: checkout Chaste repository | |
| run: | | |
| rm Chaste -rf | |
| git clone https://github.com/Chaste/Chaste.git ${{ inputs.chaste_clone_params }} | |
| - name: checkout ApPredict project | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: Chaste/ApPredict | |
| path: Chaste/projects/ApPredict | |
| submodules: recursive | |
| - name: ${CXX} version | |
| run: | | |
| ${CXX} --version | |
| ${CXX} --version > compiler.version | |
| - name: make build and test directories | |
| run: | | |
| mkdir -p Chaste/build | |
| mkdir -p ${CHASTE_TEST_OUTPUT} | |
| - name: cmake configure | |
| run: nice -n 10 cmake -DCMAKE_BUILD_TYPE=Release .. | |
| working-directory: Chaste/build | |
| - name: remove cellml | |
| run: rm -rf ApPredict/src/cellml | |
| working-directory: Chaste/projects | |
| - name: cmake configure again | |
| run: nice -n 10 cmake -DCMAKE_BUILD_TYPE=Release .. | |
| working-directory: Chaste/build | |
| - name: build core libraries | |
| run: nice -n 10 cmake --build . --parallel ${NPROC} --target chaste_core | |
| working-directory: Chaste/build | |
| - name: build heart | |
| run: nice -n 10 cmake --build . --parallel ${NPROC} --target chaste_heart | |
| working-directory: Chaste/build | |
| - name: build ApPredict | |
| run: nice -n 10 cmake --build . --parallel ${NPROC} --target project_ApPredict | |
| working-directory: Chaste/build | |
| - name: run ApPredict test pack | |
| run: nice -n 10 ctest -j${NPROC} -L ApPredict --output-on-failure | |
| working-directory: Chaste/build | |
| - name: send notifications | |
| if: failure() | |
| env: | |
| SLACK_BOT_TOKEN: ${{ secrets.SLACK_NOTIFICATIONS_BOT_TOKEN }} | |
| uses: voxmedia/github-action-slack-notify-build@v1 | |
| with: | |
| channel: ap-predict | |
| status: FAILED | |
| color: danger |