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microeco v1.7.0

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@ChiLiubio ChiLiubio released this 15 May 05:27
· 133 commits to master since this release

• add cal_caretList function in trans_classifier
• add lm and glmm method for cal_diff in trans_env
• add edgeR method in trans_diff
• update FAPROTAX to v1.2.7
• add ytext_size parameter in plot_cor of trans_env
• restructure rarefy function in microtable and trans_norm
• add rarefy, eBay, deseq2 and wrench method in trans_norm
• add Significance label for all methods in trans_alpha
• extend by_group for anova formula usage in trans_alpha
• bar_full instead of bar_type param in plot_bar of trans_abund
• show all eigens in results of cal_ordination of trans_beta
• add abundance checking and calculation in trans_classifier
• set same yaxis range for by_group in plot of trans_alpha
• fix factor issue for paired comparison in trans_diff
• fix group error in lme method of cal_diff in trans_env
• fix metagenomeseq Group issue in trans_diff
• fix sample_table one column subsetting issue in trans_diff
• set factor for group and by_group in trans_alpha
• add detailed documentation for node_roles in trans_network
• fix rep_fasta load issue in new session
• fix delete_taxonomy_lineage message issue in trans_abund
• fix NA issue of COR method in trans_network