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@AlexisRenchon
AlexisRenchon committed Sep 3, 2024
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160 changes: 147 additions & 13 deletions .buildkite/Manifest.toml
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Expand All @@ -14,6 +14,12 @@ weakdeps = ["ChainRulesCore", "EnzymeCore"]
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Expand Down Expand Up @@ -99,6 +105,18 @@ git-tree-sha1 = "d57bd3762d308bded22c3b82d033bff85f6195c6"
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Expand Down Expand Up @@ -221,6 +239,12 @@ git-tree-sha1 = "aebf55e6d7795e02ca500a689d326ac979aaf89e"
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Expand Down Expand Up @@ -361,6 +385,18 @@ weakdeps = ["GeoMakie", "Makie"]
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Expand Down Expand Up @@ -424,17 +460,11 @@ deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "DiffEqCallbacks
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Expand Down Expand Up @@ -465,6 +495,12 @@ git-tree-sha1 = "05ba0d07cd4fd8b7a39541e31a7b0254704ea581"
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Expand Down Expand Up @@ -579,6 +615,12 @@ git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8"
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Expand Down Expand Up @@ -906,6 +954,12 @@ git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef"
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Expand Down Expand Up @@ -1112,6 +1166,12 @@ git-tree-sha1 = "eb6f1f48aa994f3018cbd029a17863c6535a266d"
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Expand Down Expand Up @@ -1413,6 +1473,12 @@ git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856"
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Expand Down Expand Up @@ -1705,17 +1777,13 @@ deps = ["FastClosures", "LinearAlgebra", "Printf", "Requires", "SparseArrays", "
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Expand Down Expand Up @@ -1870,6 +1938,12 @@ version = "0.4.2"
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Expand Down Expand Up @@ -1947,6 +2021,12 @@ weakdeps = ["Adapt", "CUDA"]
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Expand Down Expand Up @@ -2089,6 +2169,12 @@ git-tree-sha1 = "963a3f28a2e65bb87a68033ea4a616002406037d"
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Expand Down Expand Up @@ -2135,6 +2221,16 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1"
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Expand Down Expand Up @@ -2288,6 +2384,12 @@ git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3"
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Expand Down Expand Up @@ -2515,6 +2617,26 @@ git-tree-sha1 = "04c968137612c4a5629fa531334bb81ad5680f00"
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Expand Down Expand Up @@ -2818,6 +2940,12 @@ git-tree-sha1 = "f35f6ab602df8413a50c4a25ca14de821e8605fb"
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Expand Down Expand Up @@ -3251,6 +3379,12 @@ git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77"
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3 changes: 3 additions & 0 deletions .buildkite/Project.toml
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Expand Up @@ -5,6 +5,7 @@ BSON = "fbb218c0-5317-5bc6-957e-2ee96dd4b1f0"
CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
ClimaAnalysis = "29b5916a-a76c-4e73-9657-3c8fd22e65e6"
ClimaCalibrate = "4347a170-ebd6-470c-89d3-5c705c0cacc2"
ClimaComms = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d"
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ClimaCoreMakie = "908f55d8-4145-4867-9c14-5dad1a479e4d"
Expand All @@ -16,12 +17,14 @@ ClimaUtilities = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
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13 changes: 13 additions & 0 deletions experiments/calibration/README.md
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# ClimaLand calibration

This folder contains scripts to perform calibration on ClimaLand simulations, using [ClimaCalibrate.jl](https://github.com/CliMA/ClimaCalibrate.jl).

Like other ClimaLand/experiments scripts, the Julia environment (Project.toml) is located in .buildkite

The structure of this folder currently mimics [ClimaAtmos.jl/calibration](https://github.com/CliMA/ClimaAtmos.jl/tree/main/calibration).

## Documentation

To understand the dependencies of our calibration workflow, read the documentation of
[ClimaCalibrate.jl](https://github.com/CliMA/ClimaCalibrate.jl) and [EnsembleKalmanProcesses.jl](https://github.com/CliMA/EnsembleKalmanProcesses.jl)

15 changes: 15 additions & 0 deletions experiments/calibration/experiment_config.jl
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# prior= prior_prognostic.toml
ensemble_size= 50
n_iterations= 5
batch_size= 1
# model_config = model_config_prognostic.yml
# output_dir = output/gcm_driven_scm
y_var_names= [g1] # calibration variables
# z_max = 4000 # [m]
# dims = 90 # num vertical levels below z_max x num variables x batch size
eki_timestep= 0.001 # timestep of eki
const_noise= 0.05 # constant noise (diagonal elements of noise cov matrix Γ)
t_start_sec = 0 # start time
t_end_sec = 60 * 60 * 24 * 7 # end time, 7 days
# g_t_start_sec = 216000.0 # start time of SCM averaging window [s] = 2.5 days
# g_t_end_sec = 259200.0 # end time of SCM averaging window [s] = 3 days (SCM length = 3 days)
2 changes: 2 additions & 0 deletions experiments/calibration/model_interface.jl
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# This is where we need run_fluxnet ?
# as a function that takes some config to run
3 changes: 3 additions & 0 deletions experiments/calibration/prior_prognostic.toml
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[g1]
prior = "constrained_gaussian(g1, 0.1, 0.03, 0, Inf)"
type = "float"
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