address duplication

Clinical-Genomics · Mar 31, 2022 · ae4539a · ae4539a
1 parent 4a93c60
commit ae4539a
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/BALSAMIC/commands/config/qc.py b/BALSAMIC/commands/config/qc.py
@@ -146,6 +146,9 @@ def qc_config(
     container_version,
 ):
 
+    if container_version:
+        balsamic_version = container_version
+
     try:
         samples = get_sample_dict(
             tumor=tumor,
@@ -157,9 +160,6 @@ def qc_config(
         LOG.error(f"File name is invalid, use convention [SAMPLE_ID]_R_[1,2].fastq.gz")
         raise click.Abort()
 
-    if container_version:
-        balsamic_version = container_version
-
     reference_config = os.path.join(
         balsamic_cache, balsamic_version, genome_version, "reference.json"
     )