add command to container tests

Clinical-Genomics · Jun 9, 2022 · c9d0f58 · c9d0f58
1 parent d7a7767
commit c9d0f58
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/container_tests/delly/delly.sh b/container_tests/delly/delly.sh
@@ -1,7 +1,7 @@
 #!/bin/bash
 # Test if commands exist
 
-valid_commands=( "delly" )
+valid_commands=( "delly" "bcftools" )
 
 for valid_command in "${valid_commands[@]}"
 do

diff --git a/container_tests/varcall_py3/varcall_py3.sh b/container_tests/varcall_py3/varcall_py3.sh
@@ -1,7 +1,7 @@
 #!/bin/bash
 # Test if commands exist
 
-valid_commands=( "bcftools" "samtools" "tabix" "vardict" "vardict-java" "svdb")
+valid_commands=( "bcftools" "samtools" "tabix" "vardict" "vardict-java" "svdb" "bwa" "tiddit")
 
 for valid_command in "${valid_commands[@]}"
 do