Code

fix: merge snv variants script#1499

Code

Draft

mathiasbio wants to merge 21 commits intodevelopClinical-Genomics/BALSAMIC:developfrom merge_snv_variants_scriptClinical-Genomics/BALSAMIC:merge_snv_variants_scriptCopy head branch name to clipboard

+497-10

Commits

Commits on Nov 11, 2024

• add merge script

  mathiasbio

  committed
  de62484

  Copy full SHA for de62484

• replace bcftools with custom script

  mathiasbio

  committed
  1605c8c

  Copy full SHA for 1605c8c

• fix script

  mathiasbio

  committed
  35401bc

  Copy full SHA for 35401bc

Commits on Nov 12, 2024

• update vcfpy

  mathiasbio

  committed
  c99b1e6

  Copy full SHA for c99b1e6

• black

  mathiasbio

  committed
  a34f0fc

  Copy full SHA for a34f0fc

• add more docstrings and typehints

  mathiasbio

  committed
  b3d5271

  Copy full SHA for b3d5271

• fix

  mathiasbio

  committed
  29e87a6

  Copy full SHA for 29e87a6

• add RPA filter

  mathiasbio

  committed
  be9373d

  Copy full SHA for be9373d

• attempt fix

  mathiasbio

  committed
  bee17f0

  Copy full SHA for bee17f0

Commits on Nov 20, 2024

• update script

  mathiasbio

  committed
  870820b

  Copy full SHA for 870820b

Commits on Nov 21, 2024

• fixes

  mathiasbio

  committed
  0bf6a27

  Copy full SHA for 0bf6a27

• fix

  mathiasbio

  committed
  c5da949

  Copy full SHA for c5da949

• fix

  mathiasbio

  committed
  f93d44e

  Copy full SHA for f93d44e

• Merge branch 'develop' into merge_snv_variants_script

  mathiasbio

  authored
  bfdd6e1

  Copy full SHA for bfdd6e1

• Merge branch 'merge_snv_variants_script' of github.com:Clinical-Genomics/BALSAMIC into merge_snv_variants_script

  mathiasbio

  committed
  5b9d7c7

  Copy full SHA for 5b9d7c7

• black

  mathiasbio

  committed
  2fab1f3

  Copy full SHA for 2fab1f3

• revert

  mathiasbio

  committed
  cd6ee22

  Copy full SHA for cd6ee22

• reformat

  mathiasbio

  committed
  2a3dd7d

  Copy full SHA for 2a3dd7d

Commits on Nov 28, 2024

• try

  mathiasbio

  committed
  95c06ef

  Copy full SHA for 95c06ef

Commits on Nov 29, 2024

• fix

  mathiasbio

  committed
  66e642c

  Copy full SHA for 66e642c

Commits on Jan 15, 2025

• update script

  mathiasbio

  committed
  a4844b6

  Copy full SHA for a4844b6