-
Notifications
You must be signed in to change notification settings - Fork 16
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
refactor: umi intervalbed #837
Conversation
Codecov Report
@@ Coverage Diff @@
## develop #837 +/- ##
========================================
Coverage 99.61% 99.61%
========================================
Files 29 29
Lines 1814 1815 +1
========================================
+ Hits 1807 1808 +1
Misses 7 7
Flags with carried forward coverage won't be shown. Click here to find out more.
Continue to review full report at Codecov.
|
@ashwini06 in regular SNV calling, the padding is 100bp. Probably you might take this into account. |
Kudos, SonarCloud Quality Gate passed! 0 Bugs No Coverage information |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
👍 👍
This PR:
While calling UMI variants using TNscope, use the panel-defined regions to restrict calls.
Fixes : #821
Review and tests: