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Releases: Clinical-Genomics/fusion-report

Release 3.1.1

28 Nov 14:37
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Bump version to 3.1.0 (#80)

3.1.0

07 Oct 07:22
95b2caa
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What's Changed

[3.1.0]
Added

Added support to run the tool without SSL chain verification for users behind proxy servers who act as MITM
Add no_ssl parameter as flag to verify or not by @rannick in https://github.com/Clinical-Genomics/fusion-report/pull/79

Changed

Scoring formula changed to: $$ score = 0.8 * \sum_{tool}^{tools provided} f(fusion, tool) + 0.2 * \sum_{db}^{dbs provided} g(fusion, db)*w(db) $$

Weights for databases are as follows:
    COSMIC (50)
    MITELMAN (50)
    FusionGDB2 (0)

[3.0.0]
Added

Options --no-cosmic/--no-fusiongdb2/--no-mitelman to download and run without those specified databases

Release 2.1.15

04 Oct 07:52
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Create temp directory into output directory and download there (#73)

Create temp directory into output directory and download there

Release 2.1.14

04 Oct 07:42
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change documentation for scoring (#78)

  • scoring and documentation

Release 2.1.13

04 Oct 07:21
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Release 2.1.12

02 Oct 13:37
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fix merge conflits

Release 2.1.11

02 Oct 13:34
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Make db optional (#77)

Added

Make databases optional with --no-cosmic --no-fusiongdb2 --no-mitelman options

Release 2.1.10

25 Jun 08:04
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update xlsx (#74)

Updated

  • Update xlsx core to 0.20.2 and update the example

Release 2.1.9

24 Jan 10:22
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Close files (#71)

  • Safely read logos

  • Safely read config

  • Restore docstring

fusion-report:2.1.5

22 Mar 08:47
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Fixed