Skip to content

Commit

Permalink
Merge branch 'master' of https://github.com/CogStack/CogStack-NiFi
Browse files Browse the repository at this point in the history
  • Loading branch information
@vladd-bit
vladd-bit committed Oct 17, 2023
2 parents 5540ad4 + 995b9ca commit 5201885
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion services/jupyter-hub/notebooks/working_with_cogstack
Submodule working_with_cogstack updated 26 files
+33 −0 .github/workflows/main.yml
+12 −2 cogstack.py
+15 −3 medcat/1_create_model/create_cdb/create_cdb.py
+15 −3 medcat/1_create_model/create_cdb/create_umls_cdb.py
+15 −4 medcat/1_create_model/create_modelpack/create_modelpack.py
+10 −3 medcat/1_create_model/create_vocab/create_vocab.py
+6 −2 medcat/2_train_model/1_unsupervised_training/unsupervised training.ipynb
+9 −1 medcat/2_train_model/1_unsupervised_training/unsupervised_medcattraining.py
+10 −1 medcat/2_train_model/1_unsupervised_training/unsupervised_training.py
+7 −2 medcat/2_train_model/2_supervised_training/meta_annotation_training.ipynb
+5 −1 medcat/3_run_model/run_model.ipynb
+13 −3 medcat/3_run_model/run_model.py
+0 −0 models/cdb/.keep
+0 −69 models/cdb/create_cdb.py
+0 −628 models/cdb/preprocessing_snomed_ct.ipynb
+0 −0 models/vocab/.keep
+0 −14 models/vocab/create_vocab.py
+2 −1 requirements.txt
+0 −0 tests/medcat/1_create_model/__init__.py
+0 −0 tests/medcat/1_create_model/create_cdb/__init__.py
+57 −0 tests/medcat/1_create_model/create_cdb/test_create_cdb.py
+0 −0 tests/medcat/1_create_model/create_vocab/__init__.py
+61 −0 tests/medcat/1_create_model/create_vocab/test_create_vocab.py
+0 −0 tests/medcat/__init__.py
+100 −0 tests/medcat/resources/example_cdb_input_snomed.csv
+100 −0 tests/medcat/resources/example_cdb_input_umls.csv

0 comments on commit 5201885

Please sign in to comment.