ci: test notebooks with nbmake (#186)

* ci: run mypy in tox sty job through pre-commit
  This is possible since #184 made mypy run serial in pre-commit

* ci: rename tox testnb job to nb
* ci: switch to nbmake
* ci: update workflows with repo-maintenance
* ci: update pip constraints and pre-commit config
* chore: use next-gen attr API
  Since attr >20.1.0 is already requested, we can switch to
  https://www.attrs.org/en/stable/api.html#next-gen
* ci: update pip constraints and pre-commit config

Co-authored-by: GitHub <noreply@github.com>

.constraints/py3.10.txt

@@ -9,7 +9,7 @@ anyio==3.4.0
 aquirdturtle-collapsible-headings==3.1.0
 argon2-cffi==21.1.0
 astroid==2.9.0
-attrs==20.3.0
+attrs==21.2.0
 babel==2.9.1
 backcall==0.2.0
 backports.entry-points-selectable==1.1.1
@@ -36,7 +36,7 @@ execnet==1.9.0
 filelock==3.4.0
 flake8==4.0.1
 flake8-blind-except==0.2.0
-flake8-bugbear==21.11.28
+flake8-bugbear==21.11.29
 flake8-builtins==1.5.3
 flake8-comprehensions==3.7.0
 flake8-plugin-utils==1.3.2
@@ -57,9 +57,8 @@ identify==2.4.0
 idna==3.3
 imagesize==1.3.0
 importlib-metadata==4.8.2
-importlib-resources==5.4.0
 iniconfig==1.1.1
-ipykernel==6.5.1
+ipykernel==6.6.0
 ipympl==0.8.2
 ipython==7.30.0
 ipython-genutils==0.2.0
@@ -77,6 +76,7 @@ jupyter-server-mathjax==0.2.3
 jupyter-sphinx==0.3.2
 jupyterlab==3.2.4
 jupyterlab-code-formatter==1.4.10
+jupyterlab-pygments==0.1.2
 jupyterlab-server==2.8.2
 jupyterlab-widgets==1.0.2
 kiwisolver==1.3.2
@@ -99,16 +99,17 @@ myst-nb==0.13.1
 myst-parser==0.15.2
 nbclassic==0.3.4
 nbclient==0.5.9
-nbconvert==5.6.1
+nbconvert==6.3.0
 nbdime==3.1.1
 nbformat==5.1.3
-nest-asyncio==1.5.1
+nbmake==1.0
+nest-asyncio==1.5.4
 nodeenv==1.6.0
 notebook==6.4.6
 numpy==1.21.4
 packaging==21.3
 pandocfilters==1.5.0
-parso==0.8.2
+parso==0.8.3
 particle==0.16.2
 pathspec==0.9.0
 pep517==0.12.0
@@ -119,7 +120,7 @@ pillow==8.4.0
 pip-tools==6.4.0
 platformdirs==2.4.0
 pluggy==1.0.0
-pre-commit==2.15.0
+pre-commit==2.16.0
 prometheus-client==0.12.0
 prompt-toolkit==3.0.23
 ptyprocess==0.7.0
@@ -128,6 +129,7 @@ pybtex==0.24.0
 pybtex-docutils==1.0.1
 pycodestyle==2.8.0
 pycparser==2.21
+pydantic==1.8.2
 pydata-sphinx-theme==0.7.2
 pydocstyle==6.1.1
 pyflakes==2.4.0
@@ -138,7 +140,6 @@ pyrsistent==0.18.0
 pytest==6.2.5
 pytest-cov==3.0.0
 pytest-forked==1.3.0
-pytest-notebook==0.6.1
 pytest-profiling==1.7.0
 pytest-xdist==2.4.0
 python-constraint==1.4.0
@@ -151,7 +152,7 @@ radon==5.1.0
 regex==2021.11.10
 requests==2.26.0
 restructuredtext-lint==1.3.2
-rich==10.15.0
+rich==10.15.2
 send2trash==1.8.0
 setuptools-scm==6.3.2
 six==1.16.0
@@ -188,7 +189,7 @@ types-docutils==0.17.1
 types-pkg-resources==0.1.3
 types-requests==2.26.1
 types-setuptools==57.4.4
-typing-extensions==4.0.0
+typing-extensions==4.0.1
 urllib3==1.26.7
 virtualenv==20.10.0
 wcwidth==0.2.5

.constraints/py3.6.txt

@@ -10,7 +10,7 @@ aquirdturtle-collapsible-headings==3.1.0
 argon2-cffi==21.1.0
 astroid==2.9.0
 async-generator==1.10
-attrs==20.3.0
+attrs==21.2.0
 babel==2.9.1
 backcall==0.2.0
 backports.entry-points-selectable==1.1.1
@@ -38,7 +38,7 @@ execnet==1.9.0
 filelock==3.4.0
 flake8==4.0.1
 flake8-blind-except==0.2.0
-flake8-bugbear==21.11.28
+flake8-bugbear==21.11.29
 flake8-builtins==1.5.3
 flake8-comprehensions==3.7.0
 flake8-plugin-utils==1.3.2
@@ -78,6 +78,7 @@ jupyter-server-mathjax==0.2.3
 jupyter-sphinx==0.3.2
 jupyterlab==3.2.4
 jupyterlab-code-formatter==1.4.10
+jupyterlab-pygments==0.1.2
 jupyterlab-server==2.8.2
 jupyterlab-widgets==1.0.2
 kiwisolver==1.3.1
@@ -99,10 +100,11 @@ myst-nb==0.13.1
 myst-parser==0.15.2
 nbclassic==0.3.4
 nbclient==0.5.9
-nbconvert==5.6.1
+nbconvert==6.0.7
 nbdime==3.1.1
 nbformat==5.1.3
-nest-asyncio==1.5.1
+nbmake==1.0
+nest-asyncio==1.5.4
 nodeenv==1.6.0
 notebook==6.4.6
 numpy==1.19.5
@@ -119,7 +121,7 @@ pillow==8.4.0
 pip-tools==6.4.0
 platformdirs==2.4.0
 pluggy==1.0.0
-pre-commit==2.15.0
+pre-commit==2.16.0
 prometheus-client==0.12.0
 prompt-toolkit==3.0.23
 ptyprocess==0.7.0
@@ -128,6 +130,7 @@ pybtex==0.24.0
 pybtex-docutils==1.0.1
 pycodestyle==2.8.0
 pycparser==2.21
+pydantic==1.8.2
 pydata-sphinx-theme==0.7.2
 pydocstyle==6.1.1
 pyflakes==2.4.0
@@ -138,7 +141,6 @@ pyrsistent==0.18.0
 pytest==6.2.5
 pytest-cov==3.0.0
 pytest-forked==1.3.0
-pytest-notebook==0.6.1
 pytest-profiling==1.7.0
 pytest-xdist==2.4.0
 python-constraint==1.4.0
@@ -151,7 +153,7 @@ radon==5.1.0
 regex==2021.11.10
 requests==2.26.0
 restructuredtext-lint==1.3.2
-rich==10.15.0
+rich==10.15.2
 send2trash==1.8.0
 six==1.16.0
 smmap==5.0.0
@@ -188,7 +190,7 @@ types-docutils==0.17.1
 types-pkg-resources==0.1.3
 types-requests==2.26.1
 types-setuptools==57.4.4
-typing-extensions==4.0.0 ; python_version < "3.8.0"
+typing-extensions==4.0.1 ; python_version < "3.8.0"
 urllib3==1.26.7
 virtualenv==20.10.0
 wcwidth==0.2.5

.constraints/py3.7.txt

@@ -10,7 +10,7 @@ aquirdturtle-collapsible-headings==3.1.0
 argcomplete==1.12.3
 argon2-cffi==21.1.0
 astroid==2.9.0
-attrs==20.3.0
+attrs==21.2.0
 babel==2.9.1
 backcall==0.2.0
 backports.entry-points-selectable==1.1.1
@@ -37,7 +37,7 @@ execnet==1.9.0
 filelock==3.4.0
 flake8==4.0.1
 flake8-blind-except==0.2.0
-flake8-bugbear==21.11.28
+flake8-bugbear==21.11.29
 flake8-builtins==1.5.3
 flake8-comprehensions==3.7.0
 flake8-plugin-utils==1.3.2
@@ -59,7 +59,7 @@ imagesize==1.3.0
 importlib-metadata==4.2.0
 importlib-resources==5.4.0
 iniconfig==1.1.1
-ipykernel==6.5.1
+ipykernel==6.6.0
 ipympl==0.8.2
 ipython==7.30.0
 ipython-genutils==0.2.0
@@ -77,6 +77,7 @@ jupyter-server-mathjax==0.2.3
 jupyter-sphinx==0.3.2
 jupyterlab==3.2.4
 jupyterlab-code-formatter==1.4.10
+jupyterlab-pygments==0.1.2
 jupyterlab-server==2.8.2
 jupyterlab-widgets==1.0.2
 kiwisolver==1.3.2
@@ -99,16 +100,17 @@ myst-nb==0.13.1
 myst-parser==0.15.2
 nbclassic==0.3.4
 nbclient==0.5.9
-nbconvert==5.6.1
+nbconvert==6.3.0
 nbdime==3.1.1
 nbformat==5.1.3
-nest-asyncio==1.5.1
+nbmake==1.0
+nest-asyncio==1.5.4
 nodeenv==1.6.0
 notebook==6.4.6
 numpy==1.21.4
 packaging==21.3
 pandocfilters==1.5.0
-parso==0.8.2
+parso==0.8.3
 particle==0.16.2
 pathspec==0.9.0
 pep517==0.12.0
@@ -119,7 +121,7 @@ pillow==8.4.0
 pip-tools==6.4.0
 platformdirs==2.4.0
 pluggy==1.0.0
-pre-commit==2.15.0
+pre-commit==2.16.0
 prometheus-client==0.12.0
 prompt-toolkit==3.0.23
 ptyprocess==0.7.0
@@ -128,6 +130,7 @@ pybtex==0.24.0
 pybtex-docutils==1.0.1
 pycodestyle==2.8.0
 pycparser==2.21
+pydantic==1.8.2
 pydata-sphinx-theme==0.7.2
 pydocstyle==6.1.1
 pyflakes==2.4.0
@@ -138,7 +141,6 @@ pyrsistent==0.18.0
 pytest==6.2.5
 pytest-cov==3.0.0
 pytest-forked==1.3.0
-pytest-notebook==0.6.1
 pytest-profiling==1.7.0
 pytest-xdist==2.4.0
 python-constraint==1.4.0
@@ -151,7 +153,7 @@ radon==5.1.0
 regex==2021.11.10
 requests==2.26.0
 restructuredtext-lint==1.3.2
-rich==10.15.0
+rich==10.15.2
 send2trash==1.8.0
 setuptools-scm==6.3.2
 six==1.16.0
@@ -189,7 +191,7 @@ types-docutils==0.17.1
 types-pkg-resources==0.1.3
 types-requests==2.26.1
 types-setuptools==57.4.4
-typing-extensions==4.0.0 ; python_version < "3.8.0"
+typing-extensions==4.0.1 ; python_version < "3.8.0"
 urllib3==1.26.7
 virtualenv==20.10.0
 wcwidth==0.2.5

.constraints/py3.8.txt

@@ -9,7 +9,7 @@ anyio==3.4.0
 aquirdturtle-collapsible-headings==3.1.0
 argon2-cffi==21.1.0
 astroid==2.9.0
-attrs==20.3.0
+attrs==21.2.0
 babel==2.9.1
 backcall==0.2.0
 backports.entry-points-selectable==1.1.1
@@ -36,7 +36,7 @@ execnet==1.9.0
 filelock==3.4.0
 flake8==4.0.1
 flake8-blind-except==0.2.0
-flake8-bugbear==21.11.28
+flake8-bugbear==21.11.29
 flake8-builtins==1.5.3
 flake8-comprehensions==3.7.0
 flake8-plugin-utils==1.3.2
@@ -59,7 +59,7 @@ imagesize==1.3.0
 importlib-metadata==4.8.2
 importlib-resources==5.4.0
 iniconfig==1.1.1
-ipykernel==6.5.1
+ipykernel==6.6.0
 ipympl==0.8.2
 ipython==7.30.0
 ipython-genutils==0.2.0
@@ -77,6 +77,7 @@ jupyter-server-mathjax==0.2.3
 jupyter-sphinx==0.3.2
 jupyterlab==3.2.4
 jupyterlab-code-formatter==1.4.10
+jupyterlab-pygments==0.1.2
 jupyterlab-server==2.8.2
 jupyterlab-widgets==1.0.2
 kiwisolver==1.3.2
@@ -99,16 +100,17 @@ myst-nb==0.13.1
 myst-parser==0.15.2
 nbclassic==0.3.4
 nbclient==0.5.9
-nbconvert==5.6.1
+nbconvert==6.3.0
 nbdime==3.1.1
 nbformat==5.1.3
-nest-asyncio==1.5.1
+nbmake==1.0
+nest-asyncio==1.5.4
 nodeenv==1.6.0
 notebook==6.4.6
 numpy==1.21.4
 packaging==21.3
 pandocfilters==1.5.0
-parso==0.8.2
+parso==0.8.3
 particle==0.16.2
 pathspec==0.9.0
 pep517==0.12.0
@@ -119,7 +121,7 @@ pillow==8.4.0
 pip-tools==6.4.0
 platformdirs==2.4.0
 pluggy==1.0.0
-pre-commit==2.15.0
+pre-commit==2.16.0
 prometheus-client==0.12.0
 prompt-toolkit==3.0.23
 ptyprocess==0.7.0
@@ -128,6 +130,7 @@ pybtex==0.24.0
 pybtex-docutils==1.0.1
 pycodestyle==2.8.0
 pycparser==2.21
+pydantic==1.8.2
 pydata-sphinx-theme==0.7.2
 pydocstyle==6.1.1
 pyflakes==2.4.0
@@ -138,7 +141,6 @@ pyrsistent==0.18.0
 pytest==6.2.5
 pytest-cov==3.0.0
 pytest-forked==1.3.0
-pytest-notebook==0.6.1
 pytest-profiling==1.7.0
 pytest-xdist==2.4.0
 python-constraint==1.4.0
@@ -151,7 +153,7 @@ radon==5.1.0
 regex==2021.11.10
 requests==2.26.0
 restructuredtext-lint==1.3.2
-rich==10.15.0
+rich==10.15.2
 send2trash==1.8.0
 setuptools-scm==6.3.2
 six==1.16.0
@@ -188,7 +190,7 @@ types-docutils==0.17.1
 types-pkg-resources==0.1.3
 types-requests==2.26.1
 types-setuptools==57.4.4
-typing-extensions==4.0.0
+typing-extensions==4.0.1
 urllib3==1.26.7
 virtualenv==20.10.0
 wcwidth==0.2.5