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ci: run notebooks with nbmake #91

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merged 13 commits into from
Dec 2, 2021
Merged

ci: run notebooks with nbmake #91

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95897ef
ci: update workflow configs with repo-maintenance
redeboer Dec 2, 2021
afca033
ci: rename tox testnb job to nb
redeboer Dec 2, 2021
103e0d9
ci: switch to nbmake
redeboer Dec 2, 2021
1a08bda
ci: update pip constraints and pre-commit config
web-flow Dec 2, 2021
3800129
fix: explicitly run pytest nbmake
redeboer Dec 2, 2021
b275e77
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Dec 2, 2021
2e0efcd
ci: update pip constraints and pre-commit config
web-flow Dec 2, 2021
0da2b17
fix: remove limits from black and pylint
redeboer Dec 2, 2021
e05cc79
Revert "fix: remove limits from black and pylint"
redeboer Dec 2, 2021
28debf0
fix: remove ipykernel version constraint
redeboer Dec 2, 2021
b1a97cb
ci: update pip constraints and pre-commit config
web-flow Dec 2, 2021
468e46c
fix: remove version limit on pyparsing
redeboer Dec 2, 2021
7d9fb70
ci: update pip constraints and pre-commit config
web-flow Dec 2, 2021
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18 changes: 10 additions & 8 deletions .constraints/py3.6.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@ argon2-cffi==21.1.0
astroid==2.7.3
astunparse==1.6.3
async-generator==1.10
attrs==20.3.0
attrs==21.2.0
babel==2.9.1
backcall==0.2.0
backports.entry-points-selectable==1.1.1
Expand Down Expand Up @@ -45,7 +45,7 @@ execnet==1.9.0
filelock==3.4.0
flake8==4.0.1
flake8-blind-except==0.2.0
flake8-bugbear==21.11.28
flake8-bugbear==21.11.29
flake8-builtins==1.5.3
flake8-comprehensions==3.7.0
flake8-plugin-utils==1.3.2
Expand Down Expand Up @@ -88,7 +88,7 @@ json5==0.9.6
jsonschema==3.2.0
jupyter==1.0.0
jupyter-cache==0.4.3
jupyter-client==6.1.12
jupyter-client==7.1.0
jupyter-console==6.4.0
jupyter-contrib-core==0.3.3
jupyter-contrib-nbextensions==0.5.1
Expand All @@ -101,6 +101,7 @@ jupyter-server-mathjax==0.2.3
jupyter-sphinx==0.3.2
jupyterlab==3.2.4
jupyterlab-code-formatter==1.4.10
jupyterlab-pygments==0.1.2
jupyterlab-server==2.8.2
jupyterlab-widgets==1.0.2
keras==2.6.0
Expand All @@ -125,10 +126,11 @@ myst-nb==0.13.1
myst-parser==0.15.2
nbclassic==0.3.4
nbclient==0.5.9
nbconvert==5.6.1
nbconvert==6.0.7
nbdime==3.1.1
nbformat==5.1.3
nest-asyncio==1.5.1
nbmake==1.0
nest-asyncio==1.5.4
nodeenv==1.6.0
notebook==6.4.6
numpy==1.19.5
Expand All @@ -148,7 +150,7 @@ pillow==8.4.0
pip-tools==6.4.0
platformdirs==2.4.0
pluggy==1.0.0
pre-commit==2.15.0
pre-commit==2.16.0
prometheus-client==0.12.0
prompt-toolkit==3.0.23
protobuf==3.19.1
Expand All @@ -160,15 +162,15 @@ pybtex==0.24.0
pybtex-docutils==1.0.1
pycodestyle==2.8.0
pycparser==2.21
pydantic==1.8.2
pydata-sphinx-theme==0.7.2
pyflakes==2.4.0
pygments==2.10.0
pylint==2.10.2 ; python_version == "3.6.*"
pyparsing==2.4.7
pyparsing==3.0.6
pyrsistent==0.18.0
pytest==6.2.5
pytest-forked==1.3.0
pytest-notebook==0.6.1
pytest-xdist==2.4.0
python-constraint==1.4.0
python-dateutil==2.8.2
Expand Down
26 changes: 14 additions & 12 deletions .constraints/py3.7.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ argcomplete==1.12.3
argon2-cffi==21.1.0
astroid==2.9.0
astunparse==1.6.3
attrs==20.3.0
attrs==21.2.0
babel==2.9.1
backcall==0.2.0
backports.entry-points-selectable==1.1.1
Expand Down Expand Up @@ -42,7 +42,7 @@ execnet==1.9.0
filelock==3.4.0
flake8==4.0.1
flake8-blind-except==0.2.0
flake8-bugbear==21.11.28
flake8-bugbear==21.11.29
flake8-builtins==1.5.3
flake8-comprehensions==3.7.0
flake8-plugin-utils==1.3.2
Expand Down Expand Up @@ -71,9 +71,9 @@ iminuit==2.8.4
importlib-metadata==4.2.0
importlib-resources==5.4.0
iniconfig==1.1.1
ipykernel==6.4.2
ipykernel==6.6.0
ipympl==0.8.2
ipython==7.30.0
ipython==7.30.1
ipython-genutils==0.2.0
ipywidgets==7.6.5
isort==5.10.1
Expand All @@ -85,7 +85,7 @@ json5==0.9.6
jsonschema==4.2.1
jupyter==1.0.0
jupyter-cache==0.4.3
jupyter-client==6.1.12
jupyter-client==7.1.0
jupyter-console==6.4.0
jupyter-contrib-core==0.3.3
jupyter-contrib-nbextensions==0.5.1
Expand All @@ -98,6 +98,7 @@ jupyter-server-mathjax==0.2.3
jupyter-sphinx==0.3.2
jupyterlab==3.2.4
jupyterlab-code-formatter==1.4.10
jupyterlab-pygments==0.1.2
jupyterlab-server==2.8.2
jupyterlab-widgets==1.0.2
keras==2.7.0
Expand All @@ -124,18 +125,19 @@ myst-nb==0.13.1
myst-parser==0.15.2
nbclassic==0.3.4
nbclient==0.5.9
nbconvert==5.6.1
nbconvert==6.3.0
nbdime==3.1.1
nbformat==5.1.3
nest-asyncio==1.5.1
nbmake==1.0
nest-asyncio==1.5.4
nodeenv==1.6.0
notebook==6.4.6
numpy==1.20.3
oauthlib==3.1.1
opt-einsum==3.3.0
packaging==21.3
pandocfilters==1.5.0
parso==0.8.2
parso==0.8.3
particle==0.16.2
pathspec==0.9.0
pep517==0.12.0
Expand All @@ -147,7 +149,7 @@ pillow==8.4.0
pip-tools==6.4.0
platformdirs==2.4.0
pluggy==1.0.0
pre-commit==2.15.0
pre-commit==2.16.0
prometheus-client==0.12.0
prompt-toolkit==3.0.23
protobuf==3.19.1
Expand All @@ -159,15 +161,15 @@ pybtex==0.24.0
pybtex-docutils==1.0.1
pycodestyle==2.8.0
pycparser==2.21
pydantic==1.8.2
pydata-sphinx-theme==0.7.2
pyflakes==2.4.0
pygments==2.10.0
pylint==2.12.1 ; python_version >= "3.7.0"
pyparsing==2.4.7
pyparsing==3.0.6
pyrsistent==0.18.0
pytest==6.2.5
pytest-forked==1.3.0
pytest-notebook==0.6.1
pytest-xdist==2.4.0
python-constraint==1.4.0
python-dateutil==2.8.2
Expand Down Expand Up @@ -229,7 +231,7 @@ tox==3.24.4
tqdm==4.62.3
traitlets==5.1.1
typed-ast==1.5.0
typing-extensions==4.0.0
typing-extensions==4.0.1
urllib3==1.26.7
virtualenv==20.10.0
wcwidth==0.2.5
Expand Down
26 changes: 14 additions & 12 deletions .constraints/py3.8.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ aquirdturtle-collapsible-headings==3.1.0
argon2-cffi==21.1.0
astroid==2.9.0
astunparse==1.6.3
attrs==20.3.0
attrs==21.2.0
babel==2.9.1
backcall==0.2.0
backports.entry-points-selectable==1.1.1
Expand Down Expand Up @@ -40,7 +40,7 @@ execnet==1.9.0
filelock==3.4.0
flake8==4.0.1
flake8-blind-except==0.2.0
flake8-bugbear==21.11.28
flake8-bugbear==21.11.29
flake8-builtins==1.5.3
flake8-comprehensions==3.7.0
flake8-plugin-utils==1.3.2
Expand Down Expand Up @@ -70,9 +70,9 @@ iminuit==2.8.4
importlib-metadata==4.8.2
importlib-resources==5.4.0
iniconfig==1.1.1
ipykernel==6.4.2
ipykernel==6.6.0
ipympl==0.8.2
ipython==7.30.0
ipython==7.30.1
ipython-genutils==0.2.0
ipywidgets==7.6.5
isort==5.10.1
Expand All @@ -84,7 +84,7 @@ json5==0.9.6
jsonschema==4.2.1
jupyter==1.0.0
jupyter-cache==0.4.3
jupyter-client==6.1.12
jupyter-client==7.1.0
jupyter-console==6.4.0
jupyter-contrib-core==0.3.3
jupyter-contrib-nbextensions==0.5.1
Expand All @@ -97,6 +97,7 @@ jupyter-server-mathjax==0.2.3
jupyter-sphinx==0.3.2
jupyterlab==3.2.4
jupyterlab-code-formatter==1.4.10
jupyterlab-pygments==0.1.2
jupyterlab-server==2.8.2
jupyterlab-widgets==1.0.2
keras==2.7.0
Expand All @@ -123,18 +124,19 @@ myst-nb==0.13.1
myst-parser==0.15.2
nbclassic==0.3.4
nbclient==0.5.9
nbconvert==5.6.1
nbconvert==6.3.0
nbdime==3.1.1
nbformat==5.1.3
nest-asyncio==1.5.1
nbmake==1.0
nest-asyncio==1.5.4
nodeenv==1.6.0
notebook==6.4.6
numpy==1.20.3
oauthlib==3.1.1
opt-einsum==3.3.0
packaging==21.3
pandocfilters==1.5.0
parso==0.8.2
parso==0.8.3
particle==0.16.2
pathspec==0.9.0
pep517==0.12.0
Expand All @@ -146,7 +148,7 @@ pillow==8.4.0
pip-tools==6.4.0
platformdirs==2.4.0
pluggy==1.0.0
pre-commit==2.15.0
pre-commit==2.16.0
prometheus-client==0.12.0
prompt-toolkit==3.0.23
protobuf==3.19.1
Expand All @@ -158,15 +160,15 @@ pybtex==0.24.0
pybtex-docutils==1.0.1
pycodestyle==2.8.0
pycparser==2.21
pydantic==1.8.2
pydata-sphinx-theme==0.7.2
pyflakes==2.4.0
pygments==2.10.0
pylint==2.12.1 ; python_version >= "3.7.0"
pyparsing==2.4.7
pyparsing==3.0.6
pyrsistent==0.18.0
pytest==6.2.5
pytest-forked==1.3.0
pytest-notebook==0.6.1
pytest-xdist==2.4.0
python-constraint==1.4.0
python-dateutil==2.8.2
Expand Down Expand Up @@ -227,7 +229,7 @@ tornado==6.1
tox==3.24.4
tqdm==4.62.3
traitlets==5.1.1
typing-extensions==4.0.0
typing-extensions==4.0.1
urllib3==1.26.7
virtualenv==20.10.0
wcwidth==0.2.5
Expand Down
27 changes: 14 additions & 13 deletions .constraints/py3.9.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ aquirdturtle-collapsible-headings==3.1.0
argon2-cffi==21.1.0
astroid==2.9.0
astunparse==1.6.3
attrs==20.3.0
attrs==21.2.0
babel==2.9.1
backcall==0.2.0
backports.entry-points-selectable==1.1.1
Expand Down Expand Up @@ -40,7 +40,7 @@ execnet==1.9.0
filelock==3.4.0
flake8==4.0.1
flake8-blind-except==0.2.0
flake8-bugbear==21.11.28
flake8-bugbear==21.11.29
flake8-builtins==1.5.3
flake8-comprehensions==3.7.0
flake8-plugin-utils==1.3.2
Expand Down Expand Up @@ -68,11 +68,10 @@ idna==3.3
imagesize==1.3.0
iminuit==2.8.4
importlib-metadata==4.8.2
importlib-resources==5.4.0
iniconfig==1.1.1
ipykernel==6.4.2
ipykernel==6.6.0
ipympl==0.8.2
ipython==7.30.0
ipython==7.30.1
ipython-genutils==0.2.0
ipywidgets==7.6.5
isort==5.10.1
Expand All @@ -84,7 +83,7 @@ json5==0.9.6
jsonschema==4.2.1
jupyter==1.0.0
jupyter-cache==0.4.3
jupyter-client==6.1.12
jupyter-client==7.1.0
jupyter-console==6.4.0
jupyter-contrib-core==0.3.3
jupyter-contrib-nbextensions==0.5.1
Expand All @@ -97,6 +96,7 @@ jupyter-server-mathjax==0.2.3
jupyter-sphinx==0.3.2
jupyterlab==3.2.4
jupyterlab-code-formatter==1.4.10
jupyterlab-pygments==0.1.2
jupyterlab-server==2.8.2
jupyterlab-widgets==1.0.2
keras==2.7.0
Expand All @@ -123,18 +123,19 @@ myst-nb==0.13.1
myst-parser==0.15.2
nbclassic==0.3.4
nbclient==0.5.9
nbconvert==5.6.1
nbconvert==6.3.0
nbdime==3.1.1
nbformat==5.1.3
nest-asyncio==1.5.1
nbmake==1.0
nest-asyncio==1.5.4
nodeenv==1.6.0
notebook==6.4.6
numpy==1.20.3
oauthlib==3.1.1
opt-einsum==3.3.0
packaging==21.3
pandocfilters==1.5.0
parso==0.8.2
parso==0.8.3
particle==0.16.2
pathspec==0.9.0
pep517==0.12.0
Expand All @@ -146,7 +147,7 @@ pillow==8.4.0
pip-tools==6.4.0
platformdirs==2.4.0
pluggy==1.0.0
pre-commit==2.15.0
pre-commit==2.16.0
prometheus-client==0.12.0
prompt-toolkit==3.0.23
protobuf==3.19.1
Expand All @@ -158,15 +159,15 @@ pybtex==0.24.0
pybtex-docutils==1.0.1
pycodestyle==2.8.0
pycparser==2.21
pydantic==1.8.2
pydata-sphinx-theme==0.7.2
pyflakes==2.4.0
pygments==2.10.0
pylint==2.12.1 ; python_version >= "3.7.0"
pyparsing==2.4.7
pyparsing==3.0.6
pyrsistent==0.18.0
pytest==6.2.5
pytest-forked==1.3.0
pytest-notebook==0.6.1
pytest-xdist==2.4.0
python-constraint==1.4.0
python-dateutil==2.8.2
Expand Down Expand Up @@ -227,7 +228,7 @@ tornado==6.1
tox==3.24.4
tqdm==4.62.3
traitlets==5.1.1
typing-extensions==4.0.0
typing-extensions==4.0.1
urllib3==1.26.7
virtualenv==20.10.0
wcwidth==0.2.5
Expand Down
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