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ShannonMets Public
Forked from PriceLab/ShannonMets** Blood metabolome predicts gut microbiome α-diversity in humans**
Jupyter Notebook UpdatedSep 18, 2019 -
Lihang Public
Forked from SmirkCao/LihangStatistical learning methods, 统计学习方法(第2版)[李航] [笔记, 代码, notebook, 参考文献, Errata, lihang]
Python UpdatedJun 27, 2019 -
PythonDataScienceHandbook Public
Forked from jakevdp/PythonDataScienceHandbookPython Data Science Handbook: full text in Jupyter Notebooks
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tormes Public
Forked from nmquijada/tormesA simple non-stop pipeline for whole bacterial genome analysis directly from raw Illumina paired-end sequencing data
Shell GNU General Public License v3.0 UpdatedJun 17, 2019 -
lihang_book_algorithm Public
Forked from WenDesi/lihang_book_algorithm致力于将李航博士《统计学习方法》一书中所有算法实现一遍
Python UpdatedApr 29, 2019 -
mlst Public
Forked from tseemann/mlst🆔 Scan contig files against PubMLST typing schemes
Perl GNU General Public License v2.0 UpdatedMar 26, 2019 -
scikit-learn Public
Forked from scikit-learn/scikit-learnscikit-learn: machine learning in Python
Python Other UpdatedMar 13, 2019 -
NN-SVG Public
Forked from alexlenail/NN-SVGPublication-ready NN-architecture schematics.
JavaScript MIT License UpdatedMar 13, 2019 -
machinelearning Public
Forked from ljpzzz/machinelearningMy blogs and code for machine learning. http://cnblogs.com/pinard
Jupyter Notebook MIT License UpdatedFeb 28, 2019 -
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handson-ml Public
Forked from ageron/handson-mlA series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.
Jupyter Notebook Apache License 2.0 UpdatedFeb 9, 2019 -
prokka Public
Forked from tseemann/prokka⚡ ♒ Rapid prokaryotic genome annotation
Perl UpdatedDec 17, 2018 -
flexbar Public
Forked from seqan/flexbarflexible barcode and adapter removal
C++ BSD 3-Clause "New" or "Revised" License UpdatedOct 17, 2018 -
Designers-Learn-Git Public
Forked from Tower-KevinLi/Designers-Learn-Git为设计师而作的GitHub的快速学习教程
UpdatedOct 12, 2018 -
Bioinformatics-Algorithms Public
Forked from ioannisa92/Bioinformatics-AlgorithmsAlgorithms for bioniformatics analysis. Examples include randomized motif search, Baum-Welch learning, Viterbi learning, Soft Decoding, and DAG algorithm
Python UpdatedOct 8, 2018 -
microbiome_helper Public
Forked from LangilleLab/microbiome_helperA repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
Perl GNU General Public License v3.0 UpdatedOct 3, 2018 -
16SrRNA-hex-tutorial Public
Forked from grbot/16SrRNA-hex-tutorial16S rRNA marker gene upstream and dowstream analysis tutorial for the UCT Hex cluster.
R MIT License UpdatedSep 5, 2018 -
IRFinder Public
Forked from williamritchie/IRFinderDetecting intron retention from RNA-Seq experiments
C++ MIT License UpdatedAug 10, 2018 -
RDPTools Public
Forked from rdpstaff/RDPToolsCollection of commonly used RDP Tools for easy building
Makefile UpdatedAug 2, 2018 -
MIDAS Public
Forked from snayfach/MIDASAn integrated pipeline for estimating strain-level genomic variation from metagenomic data
Python GNU General Public License v3.0 UpdatedJul 9, 2018 -
2017_metaSNV Public
Forked from LucasPaoli/2017_metaSNVRepository containing metaSNV codes
PostScript Other UpdatedJun 6, 2018 -
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haploclique Public
Forked from cbg-ethz/haplocliqueViral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
C++ GNU General Public License v3.0 UpdatedApr 25, 2018 -
MachineLearningAlgorithm Public
Forked from WuLC/MachineLearningAlgorithmImplementation of some machine learning algorithms
Python UpdatedApr 20, 2018 -
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machinelearninginaction Public
Forked from pbharrin/machinelearninginactionSource Code for the book: Machine Learning in Action published by Manning
HTML UpdatedFeb 18, 2018 -
FLASH2 Public
Forked from dstreett/FLASH2Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for amplicons
C GNU General Public License v3.0 UpdatedFeb 7, 2018 -
qiime Public
Forked from biocore/qiimeOfficial QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
Python GNU General Public License v2.0 UpdatedJan 23, 2018 -
Python-Rosalind Public
This repository contains my Rosalind answers for all of the following questions (all have been tested and work): Installing Python Counting DNA Nucleotides Strings and Lists Working with Files Dict…
6 UpdatedDec 21, 2017