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v0.8.1
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DRL committed Jan 3, 2017
1 parent cf6d644 commit 446d648
Showing 1 changed file with 5 additions and 12 deletions.
17 changes: 5 additions & 12 deletions kinfin.py
Original file line number Diff line number Diff line change
Expand Up @@ -2140,7 +2140,7 @@ def welcome_screen():
" % (__version__)
print screen
if __name__ == "__main__":
__version__ = "0.8.0"
__version__ = "0.8.1"
args = docopt(__doc__)
# Sanitise input
welcome_screen()
Expand Down Expand Up @@ -2183,21 +2183,14 @@ def welcome_screen():
###
'''
Pending
1. generate output for some overall metrics:
0. generate output for some overall metrics:
- singletons with domains
- specific clusters with domains
0. Executable bash script that calls
1. Executable bash script that calls
a) "xvfb-run" : if in path
b) "normal" : if not
1. Test ETE
2. AUx script to parse GOATools output, to append coverage of ALO at end of row
- input GOATtools output
- tree.node.metrics.txt (get Count of proteomes)
- specify number of total taxa
- calculate coverage, mean count
3. Hypsibius :
- cluster transcriptome
- make trees
2. Memory argument
- barcharts
- Go term enrichments
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