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env fixes
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taha-abdullah committed Sep 9, 2024
1 parent 2d0df4b commit 608c6ec
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1 change: 1 addition & 0 deletions .github/workflows/quicktest_runner.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -71,6 +71,7 @@ jobs:
- name: Run FastSurfer
run: |
echo "Running FastSurfer..."
echo "Output will be saved in data/${GITHUB_SHA:0:7}"
export FASTSURFER_HOME=$(pwd)
export THIS_RUN_OUTDIR=${GITHUB_SHA:0:7}
mkdir -p $SUBJECTS_DIR/$THIS_RUN_OUTDIR
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