Update documentation for 2.2 Release #414
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
dkuegler
force-pushed
the
feature/doc/3T
branch
from
4ad0b42
to
7d2349d
Compare
m-reuter
reviewed
Dec 14, 2023
dkuegler
force-pushed
the
feature/doc/3T
branch
from
7d2349d
to
579be8c
Compare
- update READMEs for --3T flag - update recon_surf/README.md to mention that a biasfield corrected image will only be created, if none exists. - remove mentions of the reconsurf docker image in recon_surf/README.md - update READMEs to use brun_fastsurfer.sh for multiple subjects - update comments in Tutorials (--3T flag) - fix alternative bias-field correction in recon_surf (if no biasfield image [orig_nu.mgz]) is present - extend --parallel_subjects option in brun_fastsurfer.sh (to allow serial segmentation and parallel surfaces) - set version to 2.2.0 - set default subject_list splitter to = in srun_fastsurfer.sh to make it consistent with brun_fastsurfer.sh - reorder flags in srun_fastsurfer.sh --help and add --seg_only/--surf_only - add prepended subject_id in brun_fastsurfer.sh parallel mode
dkuegler
force-pushed
the
feature/doc/3T
branch
from
579be8c
to
37fd011
Compare
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Update documentation for 2.2 Release