Implement nodata #48
Workflow file for this run
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| name: Test stable | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| Test: | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest" ] #, "macos-latest", "windows-latest"] | |
| python-version: ['3.10', '3.11'] | |
| include: | |
| - os: ubuntu-latest | |
| label: linux-64 | |
| prefix: /usr/share/miniconda3/envs/hydromt_wflow | |
| name: ${{ matrix.label }} - py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ matrix.python-version }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| steps: | |
| - name: Checkout source | |
| uses: actions/checkout@v3 | |
| - name: Generate env yaml | |
| run: | | |
| pip install tomli | |
| python make_env.py test -p ${{ matrix.python-version}}.* -n hydromt_wflow | |
| - name: Load cache | |
| id: cache | |
| uses: actions/cache/restore@v3 | |
| with: | |
| path: | | |
| /usr/share/miniconda3 | |
| ~/pycache | |
| # the below two settings mean we'll alway srestore the cache | |
| # but the cache hit output can tell us if we have to update afterwards | |
| key: test-py${{ matrix.python-version }}-${{ hashFiles('environment.yml') }} | |
| restore-keys: | | |
| test-py${{ matrix.python-version }} | |
| - name: Failed cache restore | |
| if: steps.cache.outputs.cache-matched-key == '' | |
| run: | | |
| echo "Failed to restore any cache. exiting..." | |
| exit 1 | |
| # by avoiding the mamba setup stage by loading it from cache instead we save | |
| # a lot of setup time, but we do have to do our own PATH management | |
| # hence the exports | |
| - name: Update environment | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| export PATH=/usr/share/miniconda3/bin:$PATH | |
| mamba env update -n hydromt_wflow -f environment.yml | |
| - name: Conda info | |
| run: | | |
| export PATH=/usr/share/miniconda3/bin:$PATH | |
| conda info | |
| conda list -n hydromt_wflow | |
| - name: Run tests | |
| run: | | |
| export PATH=/usr/share/miniconda3/bin:$PATH | |
| PYTHONPYCACHEPREFIX=~/pycache mamba run -n hydromt_wflow python -m pytest --verbose --cov=hydromt_wflow --cov-report xml | |
| - name: Upload code coverage | |
| uses: codecov/codecov-action@v3 |