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rt.sh separate input #2

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merged 5 commits into from
Dec 4, 2020
Merged

rt.sh separate input #2

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c4c1d1d
Add $INPUTDATA_ROOT
DusanJovic-NOAA Dec 2, 2020
e726047
Merge remote-tracking branch 'origin/develop' into rt_separate_input
DusanJovic-NOAA Dec 2, 2020
d7a7ad3
Update utest
DusanJovic-NOAA Dec 3, 2020
53080c9
rt.sh: Remove LOCKDIR before trying to stop ecflow in cleanup()
DusanJovic-NOAA Dec 4, 2020
275c097
Merge remote-tracking branch 'origin/develop' into rt_separate_input
DusanJovic-NOAA Dec 4, 2020
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60 changes: 30 additions & 30 deletions tests/fv3_conf/ccpp_c96_HAFS_v0_hwrf_run.IN
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Original file line number Diff line number Diff line change
Expand Up @@ -3,47 +3,47 @@ mkdir INPUT RESTART

if [ $IMP_PHYSICS = 8 ]; then
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/* INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/* INPUT/
else
cp -r @[RTPWD]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/grid_spec*.nc INPUT/
cp -r @[RTPWD]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/C96_grid*.nc INPUT/
cp -r @[RTPWD]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/oro_data*.nc INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/grid_spec*.nc INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/C96_grid*.nc INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data_gsd/FV3_input_data_C96_with_aerosols/oro_data*.nc INPUT/
cp ../fv3_ccpp_gsd_coldstart${RT_SUFFIX}/RESTART/* INPUT/
fi
elif [ $IMP_PHYSICS = 15 ]; then
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/FV3_input_data/INPUT/* INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data/INPUT/* INPUT/
else
cp -r @[RTPWD]/FV3_input_data/RESTART/* ./INPUT/
cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT/
fi
else
echo "ERROR, no input data configured for IMP_PHYSICS=${IMP_PHYSICS}"
exit 1
fi

cp @[RTPWD]/FV3_input_data/INPUT/aerosol.dat .
cp @[RTPWD]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[RTPWD]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[RTPWD]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[RTPWD]/FV3_input_data/*grb .
cp @[RTPWD]/FV3_input_data/*_table .
cp @[RTPWD]/FV3_input_data/*configure .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/*grb .
cp @[INPUTDATA_ROOT]/FV3_input_data/*_table .
cp @[INPUTDATA_ROOT]/FV3_input_data/*configure .

# Copy landuse/soil/vegetation parameter tables for HWRF Noah LSM
cp @[RTPWD]/FV3_input_data_hafs/GENPARM.TBL .
cp @[RTPWD]/FV3_input_data_hafs/SOILPARM.TBL .
cp @[RTPWD]/FV3_input_data_hafs/VEGPARM.TBL .
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/GENPARM.TBL .
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/SOILPARM.TBL .
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/VEGPARM.TBL .

# Copy diag table, depending on microphysics choice
if [ $IMP_PHYSICS = 8 ]; then
cp @[RTPWD]/FV3_input_data_gsd/diag_table_gsd_noah diag_table
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/diag_table_gsd_noah diag_table
elif [ $IMP_PHYSICS = 15 ]; then
if [ $IOVR = 4 ]; then
cp @[RTPWD]/FV3_input_data_hafs/diag_table_FA_HWRF diag_table
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/diag_table_FA_HWRF diag_table
else
cp @[RTPWD]/FV3_input_data_hafs/diag_table_FA diag_table
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/diag_table_FA diag_table
fi
else
echo "ERROR, no diag table configured for IMP_PHYSICS=${IMP_PHYSICS}"
Expand All @@ -54,32 +54,32 @@ fi
if [ $IMP_PHYSICS = 8 ]; then
if [ $LTAEROSOL = .T. ]; then
if [ $DO_MYNNEDMF = .T. ] || [ $SATMEDMF = .T. ]; then
cp @[RTPWD]/FV3_input_data_gsd/field_table_gsd field_table
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/field_table_gsd field_table
else
cp @[RTPWD]/FV3_input_data_gsd/field_table_gf_thompson field_table
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/field_table_gf_thompson field_table
fi
else
if [ $DO_MYNNEDMF = .T. ] || [ $SATMEDMF = .T. ]; then
echo "ERROR, no field table configured for Thompson MP without aerosols but with MYNN or SATMEDMF (need TKE)"
exit 1
else
cp @[RTPWD]/FV3_input_data_gsd/field_table_thompson_noaero field_table
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/field_table_thompson_noaero field_table
fi
fi
elif [ $IMP_PHYSICS = 15 ]; then
# Copy field table for Ferrier-Aligo MP
cp @[RTPWD]/FV3_input_data_hafs/field_table_FA_nwat4 field_table
cp @[INPUTDATA_ROOT]/FV3_input_data_hafs/field_table_FA_nwat4 field_table
else
echo "ERROR, no field table configured for IMP_PHYSICS=${IMP_PHYSICS}"
exit 1
fi

# Thompson or F-A MP lookup tables
if [ $IMP_PHYSICS = 8 ]; then
cp @[RTPWD]/FV3_input_data_gsd/qr_acr_qs.dat .
cp @[RTPWD]/FV3_input_data_gsd/qr_acr_qg.dat .
cp @[RTPWD]/FV3_input_data_gsd/freezeH2O.dat .
cp @[RTPWD]/FV3_input_data_gsd/CCN_ACTIVATE.BIN .
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/qr_acr_qs.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/qr_acr_qg.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/freezeH2O.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/CCN_ACTIVATE.BIN .
elif [ $IMP_PHYSICS = 15 ]; then
cp @[RTPWD]/FV3_input_data/DETAMPNEW_DATA* .
cp @[INPUTDATA_ROOT]/FV3_input_data/DETAMPNEW_DATA* .
fi
32 changes: 16 additions & 16 deletions tests/fv3_conf/ccpp_control_run.IN
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Original file line number Diff line number Diff line change
Expand Up @@ -12,15 +12,15 @@ echo "inputdir=$inputdir,NPX=$NPX"

UNIT_TEST=${UNIT_TEST:-false}
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/${inputdir}/INPUT .
cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART

if [[ ${UNIT_TEST} == false ]]; then
cp -r @[RTPWD]/${inputdir}/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/${inputdir}/RESTART/* ./INPUT
else
cp -r @[RTPWD]/${inputdir}/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/${inputdir}/RESTART/* ./INPUT
rm -f INPUT/fv_core.res.*
rm -f INPUT/fv_srf_wnd.res.*
rm -f INPUT/fv_tracer.res.*
Expand All @@ -35,24 +35,24 @@ else
fi
fi

cp @[RTPWD]/${inputdir}/INPUT/aerosol.dat .
cp @[RTPWD]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
if [ $OZ_PHYS_NEW = .T. ]; then
cp @[RTPWD]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
elif [ $OZ_PHYS_OLD = .T. ]; then
cp @[RTPWD]/${inputdir}/INPUT/global_o3prdlos.f77 .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/global_o3prdlos.f77 .
fi
if [ $H2O_PHYS = .T. ]; then
cp @[RTPWD]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
fi
cp @[RTPWD]/${inputdir}/*grb .
cp @[RTPWD]/${inputdir}/*_table .
cp @[RTPWD]/${inputdir}/*configure .
cp @[INPUTDATA_ROOT]/${inputdir}/*grb .
cp @[INPUTDATA_ROOT]/${inputdir}/*_table .
cp @[INPUTDATA_ROOT]/${inputdir}/*configure .

if [ $CPLWAV = .T. ]; then
cp @[RTPWD]/WW3_input_data/mod_def.* .
cp @[RTPWD]/WW3_input_data/@[SYEAR]@[SMONTH]@[SDAY]/ww3_multi.inp .
cp @[RTPWD]/WW3_input_data/@[SYEAR]@[SMONTH]@[SDAY]/rmp_src* .
cp @[INPUTDATA_ROOT]/WW3_input_data/mod_def.* .
cp @[INPUTDATA_ROOT]/WW3_input_data/@[SYEAR]@[SMONTH]@[SDAY]/ww3_multi.inp .
cp @[INPUTDATA_ROOT]/WW3_input_data/@[SYEAR]@[SMONTH]@[SDAY]/rmp_src* .
fi
26 changes: 13 additions & 13 deletions tests/fv3_conf/ccpp_cpt_run.IN
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Original file line number Diff line number Diff line change
@@ -1,20 +1,20 @@
rm -fr INPUT RESTART
inputdir=FV3_input_data_127
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/${inputdir}/INPUT .
cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART
cp -r @[RTPWD]/${inputdir}/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/${inputdir}/RESTART/* ./INPUT
fi
cp @[RTPWD]/${inputdir}/INPUT/aerosol.dat .
cp @[RTPWD]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
cp @[RTPWD]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[RTPWD]/${inputdir}/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[RTPWD]/${inputdir}/*grb .
cp @[RTPWD]/${inputdir}/*_table .
cp @[RTPWD]/${inputdir}/diag_table_mg3tke diag_table
cp @[RTPWD]/${inputdir}/field_table_csawmg3shoc field_table
cp @[RTPWD]/${inputdir}/*configure .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/${inputdir}/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/${inputdir}/*grb .
cp @[INPUTDATA_ROOT]/${inputdir}/*_table .
cp @[INPUTDATA_ROOT]/${inputdir}/diag_table_mg3tke diag_table
cp @[INPUTDATA_ROOT]/${inputdir}/field_table_csawmg3shoc field_table
cp @[INPUTDATA_ROOT]/${inputdir}/*configure .
26 changes: 13 additions & 13 deletions tests/fv3_conf/ccpp_csawmg3shoc127_run.IN
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Original file line number Diff line number Diff line change
@@ -1,20 +1,20 @@
rm -fr INPUT RESTART
inputdir=FV3_input_data_127
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/${inputdir}/INPUT .
cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART
cp -r @[RTPWD]/${inputdir}/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/${inputdir}/RESTART/* ./INPUT
fi
cp @[RTPWD]/${inputdir}/INPUT/aerosol.dat .
cp @[RTPWD]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
cp @[RTPWD]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[RTPWD]/${inputdir}/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[RTPWD]/${inputdir}/*grb .
cp @[RTPWD]/${inputdir}/*_table .
cp @[RTPWD]/${inputdir}/diag_table_mg3tke diag_table
cp @[RTPWD]/${inputdir}/field_table_csawmg3shoc field_table
cp @[RTPWD]/${inputdir}/*configure .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/${inputdir}/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/${inputdir}/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/${inputdir}/*grb .
cp @[INPUTDATA_ROOT]/${inputdir}/*_table .
cp @[INPUTDATA_ROOT]/${inputdir}/diag_table_mg3tke diag_table
cp @[INPUTDATA_ROOT]/${inputdir}/field_table_csawmg3shoc field_table
cp @[INPUTDATA_ROOT]/${inputdir}/*configure .
46 changes: 23 additions & 23 deletions tests/fv3_conf/ccpp_csawmg_run.IN
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Original file line number Diff line number Diff line change
Expand Up @@ -2,15 +2,15 @@ rm -fr INPUT RESTART

UNIT_TEST=${UNIT_TEST:-false}
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/FV3_input_data/INPUT .
cp -r @[INPUTDATA_ROOT]/FV3_input_data/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART

if [[ ${UNIT_TEST} == false ]]; then
cp -r @[RTPWD]/FV3_input_data/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT
else
cp -r @[RTPWD]/FV3_input_data/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT
rm -f INPUT/fv_core.res.*
rm -f INPUT/fv_srf_wnd.res.*
rm -f INPUT/fv_tracer.res.*
Expand All @@ -25,26 +25,26 @@ else
fi
fi

cp @[RTPWD]/FV3_input_data/INPUT/aerosol.dat .
cp @[RTPWD]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[RTPWD]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[RTPWD]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[RTPWD]/FV3_input_data/*grb .
cp @[RTPWD]/FV3_input_data/*_table .
cp @[RTPWD]/FV3_input_data/diag_table_mgrs diag_table
#cp @[RTPWD]/FV3_input_data/field_table_mgrs field_table
cp @[RTPWD]/FV3_input_data/field_table_csawmg field_table
cp @[RTPWD]/FV3_input_data/*configure .
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/MERRA2/merra2C.aerclim.2003-2014.*nc .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/*grb .
cp @[INPUTDATA_ROOT]/FV3_input_data/*_table .
cp @[INPUTDATA_ROOT]/FV3_input_data/diag_table_mgrs diag_table
#cp @[INPUTDATA_ROOT]/FV3_input_data/field_table_mgrs field_table
cp @[INPUTDATA_ROOT]/FV3_input_data/field_table_csawmg field_table
cp @[INPUTDATA_ROOT]/FV3_input_data/*configure .
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/MERRA2/merra2C.aerclim.2003-2014.*nc .
for n in 01 02 03 04 05 06 07 08 09 10 11 12; do
ln -sf merra2C.aerclim.2003-2014.m${n}.nc aeroclim.m${n}.nc
done
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NAAI_monclimo2.nc cam5_4_143_NAAI_monclimo2.nc
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NPCCN_monclimo2.nc cam5_4_143_NPCCN_monclimo2.nc
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_BC.v1_3.dat optics_BC.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_OC.v1_3.dat optics_OC.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_DU.v15_3.dat optics_DU.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SS.v3_3.dat optics_SS.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SU.v1_3.dat optics_SU.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NAAI_monclimo2.nc cam5_4_143_NAAI_monclimo2.nc
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NPCCN_monclimo2.nc cam5_4_143_NPCCN_monclimo2.nc
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_BC.v1_3.dat optics_BC.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_OC.v1_3.dat optics_OC.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_DU.v15_3.dat optics_DU.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SS.v3_3.dat optics_SS.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SU.v1_3.dat optics_SU.dat
44 changes: 22 additions & 22 deletions tests/fv3_conf/ccpp_csawmgshoc_run.IN
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Original file line number Diff line number Diff line change
@@ -1,31 +1,31 @@
rm -fr INPUT RESTART
if [ $WARM_START = .F. ]; then
cp -r @[RTPWD]/FV3_input_data/INPUT .
cp -r @[INPUTDATA_ROOT]/FV3_input_data/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART
cp -r @[RTPWD]/FV3_input_data/RESTART/* ./INPUT
cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT
fi
cp @[RTPWD]/FV3_input_data/INPUT/aerosol.dat .
cp @[RTPWD]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[RTPWD]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[RTPWD]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[RTPWD]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[RTPWD]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[RTPWD]/FV3_input_data/*grb .
cp @[RTPWD]/FV3_input_data/*_table .
cp @[RTPWD]/FV3_input_data/diag_table_mgtkers diag_table
#cp @[RTPWD]/FV3_input_data/field_table_mgtkers field_table
cp @[RTPWD]/FV3_input_data/field_table_csawmgshoc field_table
cp @[RTPWD]/FV3_input_data/*configure .
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/MERRA2/merra2C.aerclim.2003-2014.*nc .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/solarconstant_noaa_an.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/ozprdlos_2015_new_sbuvO3_tclm15_nuchem.f77 ./global_o3prdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/global_h2o_pltc.f77 ./global_h2oprdlos.f77
cp @[INPUTDATA_ROOT]/FV3_input_data/*grb .
cp @[INPUTDATA_ROOT]/FV3_input_data/*_table .
cp @[INPUTDATA_ROOT]/FV3_input_data/diag_table_mgtkers diag_table
#cp @[INPUTDATA_ROOT]/FV3_input_data/field_table_mgtkers field_table
cp @[INPUTDATA_ROOT]/FV3_input_data/field_table_csawmgshoc field_table
cp @[INPUTDATA_ROOT]/FV3_input_data/*configure .
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/MERRA2/merra2C.aerclim.2003-2014.*nc .
for n in 01 02 03 04 05 06 07 08 09 10 11 12; do
ln -sf merra2C.aerclim.2003-2014.m${n}.nc aeroclim.m${n}.nc
done
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NAAI_monclimo2.nc cam5_4_143_NAAI_monclimo2.nc
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NPCCN_monclimo2.nc cam5_4_143_NPCCN_monclimo2.nc
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_BC.v1_3.dat optics_BC.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_OC.v1_3.dat optics_OC.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_DU.v15_3.dat optics_DU.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SS.v3_3.dat optics_SS.dat
cp @[RTPWD]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SU.v1_3.dat optics_SU.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NAAI_monclimo2.nc cam5_4_143_NAAI_monclimo2.nc
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/mg2_IN_CCN/cam5_4_143_NPCCN_monclimo2.nc cam5_4_143_NPCCN_monclimo2.nc
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_BC.v1_3.dat optics_BC.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_OC.v1_3.dat optics_OC.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_DU.v15_3.dat optics_DU.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SS.v3_3.dat optics_SS.dat
cp @[INPUTDATA_ROOT]/FV3_input_data_INCCN_aeroclim/aer_data/LUTS/optics_SU.v1_3.dat optics_SU.dat
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