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Ionization module #260

Merged
merged 60 commits into from
Aug 21, 2019
Merged

Ionization module #260

merged 60 commits into from
Aug 21, 2019

Commits on Aug 4, 2019

  1. add ionization_level component

    @MaxThevenet
    MaxThevenet committed Aug 4, 2019
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  2. add ionization initialization

    @MaxThevenet
    MaxThevenet committed Aug 4, 2019
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  3. add ionization table data

    @MaxThevenet
    MaxThevenet committed Aug 4, 2019
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  4. add target species handling

    @MaxThevenet
    MaxThevenet committed Aug 4, 2019
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  5. minor cleaning

    @MaxThevenet
    MaxThevenet committed Aug 4, 2019
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Commits on Aug 5, 2019

  1. typo

    @MaxThevenet
    MaxThevenet committed Aug 5, 2019
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Commits on Aug 6, 2019

  1. get dt from WarpX instance, to initialize ionization prefactors

    @MaxThevenet
    MaxThevenet committed Aug 6, 2019
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  2. cleaning, and add capability for boosted frame runtime particle compo… 

    …nents
    @MaxThevenet
    MaxThevenet committed Aug 6, 2019
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  3. escape if no ionized particle

    @MaxThevenet
    MaxThevenet committed Aug 6, 2019
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Commits on Aug 7, 2019

  1. use c++ deposition by default. includes old attribs

    @MaxThevenet
    MaxThevenet committed Aug 7, 2019
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  2. remove copy of old attribs, use current values instead for simplicity

    @MaxThevenet
    MaxThevenet committed Aug 7, 2019
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  3. cleaning, remote outdated functions

    @MaxThevenet
    MaxThevenet committed Aug 7, 2019
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  4. add example

    @MaxThevenet
    MaxThevenet committed Aug 7, 2019
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  5. add profile data, remove typo in example

    @MaxThevenet
    MaxThevenet committed Aug 7, 2019
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Commits on Aug 8, 2019

  1. use amrex::inclusive_scan for portability

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  2. merge conflicts

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  3. exclusive_scan requires ManagedDeviceVector

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  4. Add doc

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  5. Merge branch 'dev' into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  6. Merge branch 'dev' into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  7. Merge branch 'dev' of https://github.com/ECP-WarpX/WarpX into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  8. change ionization level from Real to Int

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  9. Merge branch 'dev' into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  10. add some const, and remove unnecessary includes

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  11. catch errors in inputs

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  12. add few comments

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  13. minor cleaning, remove commented lines

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  14. remove Langmuir 2d psatd tests as it fails randomly (on Travis, not l… 

    …ocal)
    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  15. use Weiqun's convention: space before brackets for function declarati… 

    …on and definition
    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  16. final minor cleaning

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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  17. remove unused function

    @MaxThevenet
    MaxThevenet committed Aug 8, 2019
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Commits on Aug 9, 2019

  1. hidden typo '-.-

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  2. add test for ionization

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  3. analysis script

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  4. Merge branch 'ion_lev' of https://github.com/ECP-WarpX/WarpX into ion… 

    …_lev
    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  5. update permission for analysis script

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  6. test

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  7. need higher resolution for ionization test

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  8. increase tolerance for ionization test. Rate increases with resolution

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  9. convert int to float in division coz tests use Python2

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  10. fix merge conflicts

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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  11. back to initial tolerance for ionization test

    @MaxThevenet
    MaxThevenet committed Aug 9, 2019
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Commits on Aug 12, 2019

  1. typos in doc, and rename ionization_product

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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  2. use ionization_initial_level

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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  3. remove unnecessary comments in input files

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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  4. cleaning and allow ionization with subcycling

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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  5. typo

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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  6. add plotting capability in ionization rt analysis script

    @MaxThevenet
    MaxThevenet committed Aug 12, 2019
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Commits on Aug 20, 2019

  1. Merge branch 'dev' into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 20, 2019
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  2. copy member variables to tmp local variables

    @MaxThevenet
    MaxThevenet committed Aug 20, 2019
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  3. cleaning ionization examples

    @MaxThevenet
    MaxThevenet committed Aug 20, 2019
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Commits on Aug 21, 2019

  1. add comments and make sure charge=q_e for ionizable species

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  2. Merge branch 'dev' into ion_lev

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  3. charge deposition depends on ionization level

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  4. add comments for charge deposition

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  5. add back element to plot flags

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  6. fix bug in particle output

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  7. had deleted call to DepositCharge by mistake. This fixes it

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  8. typo

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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  9. error if ionization on GPU

    @MaxThevenet
    MaxThevenet committed Aug 21, 2019
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