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{2023.06}[foss/2021a] R v4.1.0 #328

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merged 7 commits into from
Sep 29, 2023
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@boegel boegel commented Sep 7, 2023

edit (2023-09-19) missing installations for R-4.1.0-foss-2021a.eb:

23 out of 106 required modules missing:

* pixman/0.40.0-GCCcore-10.3.0 (pixman-0.40.0-GCCcore-10.3.0.eb)
* nettle/3.7.2-GCCcore-10.3.0 (nettle-3.7.2-GCCcore-10.3.0.eb)
* cairo/1.16.0-GCCcore-10.3.0 (cairo-1.16.0-GCCcore-10.3.0.eb)
* Xvfb/1.20.11-GCCcore-10.3.0 (Xvfb-1.20.11-GCCcore-10.3.0.eb)
* Tk/8.6.11-GCCcore-10.3.0 (Tk-8.6.11-GCCcore-10.3.0.eb)
* NLopt/2.7.0-GCCcore-10.3.0 (NLopt-2.7.0-GCCcore-10.3.0.eb)
* libogg/1.3.4-GCCcore-10.3.0 (libogg-1.3.4-GCCcore-10.3.0.eb)
* FLAC/1.3.3-GCCcore-10.3.0 (FLAC-1.3.3-GCCcore-10.3.0.eb)
* libvorbis/1.3.7-GCCcore-10.3.0 (libvorbis-1.3.7-GCCcore-10.3.0.eb)
* libsndfile/1.0.31-GCCcore-10.3.0 (libsndfile-1.0.31-GCCcore-10.3.0.eb)
* UDUNITS/2.2.28-GCCcore-10.3.0 (UDUNITS-2.2.28-GCCcore-10.3.0.eb)
* GSL/2.7-GCC-10.3.0 (GSL-2.7-GCC-10.3.0.eb)
* GLPK/5.0-GCCcore-10.3.0 (GLPK-5.0-GCCcore-10.3.0.eb)
* Ghostscript/9.54.0-GCCcore-10.3.0 (Ghostscript-9.54.0-GCCcore-10.3.0.eb)
* nodejs/14.17.0-GCCcore-10.3.0 (nodejs-14.17.0-GCCcore-10.3.0.eb)
* LittleCMS/2.12-GCCcore-10.3.0 (LittleCMS-2.12-GCCcore-10.3.0.eb)
* GObject-Introspection/1.68.0-GCCcore-10.3.0 (GObject-Introspection-1.68.0-GCCcore-10.3.0.eb)
* libgit2/1.1.0-GCCcore-10.3.0 (libgit2-1.1.0-GCCcore-10.3.0.eb)
* HarfBuzz/2.8.1-GCCcore-10.3.0 (HarfBuzz-2.8.1-GCCcore-10.3.0.eb)
* FriBidi/1.0.10-GCCcore-10.3.0 (FriBidi-1.0.10-GCCcore-10.3.0.eb)
* Pango/1.48.5-GCCcore-10.3.0 (Pango-1.48.5-GCCcore-10.3.0.eb)
* ImageMagick/7.0.11-14-GCCcore-10.3.0 (ImageMagick-7.0.11-14-GCCcore-10.3.0.eb)
* R/4.1.0-foss-2021a (R-4.1.0-foss-2021a.eb)

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eessi-bot bot commented Sep 7, 2023

Instance eessi-bot-citc-aws is configured to build:

  • arch x86_64/generic for repo eessi-2021.12
  • arch x86_64/generic for repo eessi-2023.06-compat
  • arch x86_64/generic for repo eessi-2023.06-software
  • arch x86_64/intel/haswell for repo eessi-2021.12
  • arch x86_64/intel/haswell for repo eessi-2023.06-compat
  • arch x86_64/intel/haswell for repo eessi-2023.06-software
  • arch x86_64/intel/skylake_avx512 for repo eessi-2021.12
  • arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-compat
  • arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-software
  • arch x86_64/amd/zen2 for repo eessi-2021.12
  • arch x86_64/amd/zen2 for repo eessi-2023.06-compat
  • arch x86_64/amd/zen2 for repo eessi-2023.06-software
  • arch x86_64/amd/zen3 for repo eessi-2021.12
  • arch x86_64/amd/zen3 for repo eessi-2023.06-compat
  • arch x86_64/amd/zen3 for repo eessi-2023.06-software
  • arch aarch64/generic for repo eessi-2021.12
  • arch aarch64/generic for repo eessi-2023.06-compat
  • arch aarch64/generic for repo eessi-2023.06-software
  • arch aarch64/neoverse_n1 for repo eessi-2021.12
  • arch aarch64/neoverse_n1 for repo eessi-2023.06-compat
  • arch aarch64/neoverse_n1 for repo eessi-2023.06-software
  • arch aarch64/neoverse_v1 for repo eessi-2021.12
  • arch aarch64/neoverse_v1 for repo eessi-2023.06-compat
  • arch aarch64/neoverse_v1 for repo eessi-2023.06-software

@boegel boegel force-pushed the 2023.06_2021a_R-4.1.0 branch from 6317341 to 401a35f Compare September 7, 2023 11:34
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boegel commented Sep 7, 2023

bot: build repo:eessi-2023.06-software arch:x86_64/generic
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_v1

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eessi-bot bot commented Sep 7, 2023

Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_v1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1
  • handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

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eessi-bot bot commented Sep 7, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7201

date job status comment
Sep 07 11:35:20 UTC 2023 submitted job id 7201 awaits release by job manager
Sep 07 11:36:21 UTC 2023 released job awaits launch by Slurm scheduler
Sep 07 11:43:49 UTC 2023 running job 7201 is running
Sep 07 11:59:25 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7201.out
❌ found message matching ERROR:
❌ found message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1694087877.tar.gzsize: 12 MiB (13262889 bytes)
entries: 285
modules under 2023.06/software/linux/x86_64/generic/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/generic/software
cairo/1.16.0-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/generic
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 7, 2023

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7202

date job status comment
Sep 07 11:35:27 UTC 2023 submitted job id 7202 awaits release by job manager
Sep 07 11:36:19 UTC 2023 released job awaits launch by Slurm scheduler
Sep 07 11:40:11 UTC 2023 running job 7202 is running
Sep 07 11:55:50 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7202.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_v1-1694087716.tar.gzsize: 12 MiB (13438101 bytes)
entries: 285
modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/neoverse_v1/software
cairo/1.16.0-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
other under 2023.06/software/linux/aarch64/neoverse_v1
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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boegel commented Sep 7, 2023

Job 7201

ERROR: Failed to get data for PR #18320 from easybuilders/easybuild-easyconfigs (HTTP Error 403: rate limit exceeded)

Job 7202 failed on completing the installation of Xvfb when copying xvfb-run (see also updated hook in #299)

== postprocessing...
  >> running command:
        [started at: 2023-09-07 11:53:23]
        [working dir: /tmp/bot/easybuild/build/Xvfb/1.20.11/GCCcore-10.3.0/xorg-server-1.20.11]
        [output logged in /tmp/eb-qlsceeif/eb-yh_y18f6/eb-kal374ga/eb-33hdsg_u/eb-tse0gvls/eb-kos01ey0/eb-5vjxiz40/eb-yx01rwsi/eb-ht1t6cwg/eb-__z_bzyj/eb-n79h8hug/eb-fml_f7u1/eb-9esw_ibx/easybuild-run_cmd-mv1qmgzl.log]
        cp -a xvfb-run /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/ && chmod u+x  /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/xvfb-run
  >> command completed: exit 1, ran in < 1s
== ... (took < 1 sec)
== FAILED: Installation ended unsuccessfully (build directory: /tmp/bot/easybuild/build/Xvfb/1.20.11/GCCcore-10.3.0): build failed (first 300 chars): cmd "cp -a xvfb-run /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/ && chmod u+x  /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/xvfb-run" exited with exi (took 3 mins 59 secs)
== Results of the build can be found in the log file(s) /tmp/eb-qlsceeif/eb-yh_y18f6/eb-kal374ga/eb-33hdsg_u/eb-tse0gvls/eb-kos01ey0/eb-5vjxiz40/eb-yx01rwsi/eb-ht1t6cwg/eb-__z_bzyj/eb-n79h8hug/eb-fml_f7u1/eb-9esw_ibx/easybuild-Xvfb-1.20.11-20230907.114923.dItUG.log
0:08:43  3 out of 33 easyconfigs done: nettle/3.7.2-GCCcore-10.3.0 (OK), cairo/1ERROR: Build of /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/EasyBuild/4.7.2/easybuild/easyconfigs/x/Xvfb/Xvfb-1.20.11-GCCcore-10.3.0.eb failed (err: 'build failed (first 300 chars): cmd "cp -a xvfb-run /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/ && chmod u+x  /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/aarch64/neoverse_v1/software/Xvfb/1.20.11-GCCcore-10.3.0/bin/xvfb-run" exited with exi')

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boegel commented Sep 7, 2023

I'll chip away some of the required dependencies here while looking into the Xvfb issue, via:

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boegel commented Sep 19, 2023

bot: build repo:eessi-2023.06-software arch:x86_64/generic
bot: build repo:eessi-2023.06-software arch:x86_64/intel/haswell
bot: build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512
bot: build repo:eessi-2023.06-software arch:x86_64/amd/zen2
bot: build repo:eessi-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi-2023.06-software arch:aarch64/generic
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_n1
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_v1

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eessi-bot bot commented Sep 19, 2023

Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi-2023.06-software arch:x86_64/intel/haswell from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/haswell
  • received bot command build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512
  • received bot command build repo:eessi-2023.06-software arch:x86_64/amd/zen2 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/amd/zen2
  • received bot command build repo:eessi-2023.06-software arch:x86_64/amd/zen3 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/amd/zen3
  • received bot command build repo:eessi-2023.06-software arch:aarch64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/generic
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_n1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_n1
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_v1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1
  • handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/intel/haswell resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/amd/zen2 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/amd/zen3 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_n1 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

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eessi-bot bot commented Sep 19, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7428

date job status comment
Sep 19 13:37:10 UTC 2023 submitted job id 7428 awaits release by job manager
Sep 19 13:37:56 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:41:20 UTC 2023 running job 7428 is running
Sep 19 15:58:24 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7428.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1695138902.tar.gzsize: 116 MiB (122149357 bytes)
entries: 9463
modules under 2023.06/software/linux/x86_64/generic/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/generic/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/generic
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 19, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-haswell for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7429

date job status comment
Sep 19 13:37:17 UTC 2023 submitted job id 7429 awaits release by job manager
Sep 19 13:37:54 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:41:18 UTC 2023 running job 7429 is running
Sep 19 14:01:33 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7429.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-haswell-1695132036.tar.gzsize: 19 MiB (20322198 bytes)
entries: 1140
modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/intel/haswell/software
cairo/1.16.0-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/intel/haswell
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 19, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7430

date job status comment
Sep 19 13:37:24 UTC 2023 submitted job id 7430 awaits release by job manager
Sep 19 13:37:52 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:41:16 UTC 2023 running job 7430 is running
Sep 19 14:14:24 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7430.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1695132791.tar.gzsize: 69 MiB (73114122 bytes)
entries: 3424
modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/intel/skylake_avx512
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen2 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7431

date job status comment
Sep 19 13:37:31 UTC 2023 submitted job id 7431 awaits release by job manager
Sep 19 13:37:49 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:41:14 UTC 2023 running job 7431 is running
Sep 19 15:45:40 UTC 2023 finished
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✅ job output file slurm-7431.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen2-1695138239.tar.gzsize: 117 MiB (123635079 bytes)
entries: 9463
modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/amd/zen2/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
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ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/amd/zen2
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7432

date job status comment
Sep 19 13:37:38 UTC 2023 submitted job id 7432 awaits release by job manager
Sep 19 13:37:47 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:41:11 UTC 2023 running job 7432 is running
Sep 19 14:13:15 UTC 2023 finished
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✅ job output file slurm-7432.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen3-1695132703.tar.gzsize: 69 MiB (73079397 bytes)
entries: 3424
modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
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GSL/2.7-GCC-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/amd/zen3/software
cairo/1.16.0-GCCcore-10.3.0
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Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
libogg/1.3.4-GCCcore-10.3.0
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libvorbis/1.3.7-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
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.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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New job on instance eessi-bot-citc-aws for architecture aarch64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7433

date job status comment
Sep 19 13:37:45 UTC 2023 submitted job id 7433 awaits release by job manager
Sep 19 13:39:05 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:42:34 UTC 2023 running job 7433 is running
Sep 19 15:32:45 UTC 2023 finished
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✅ job output file slurm-7433.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1695137438.tar.gzsize: 115 MiB (121451541 bytes)
entries: 9463
modules under 2023.06/software/linux/aarch64/generic/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
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UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/generic/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
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ImageMagick/7.0.11-14-GCCcore-10.3.0
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libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
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.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 19, 2023

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_n1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7434

date job status comment
Sep 19 13:37:51 UTC 2023 submitted job id 7434 awaits release by job manager
Sep 19 13:39:02 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:42:32 UTC 2023 running job 7434 is running
Sep 19 15:32:43 UTC 2023 finished
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✅ job output file slurm-7434.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_n1-1695137423.tar.gzsize: 115 MiB (121385658 bytes)
entries: 9463
modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all
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FLAC/1.3.3-GCCcore-10.3.0.lua
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Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
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UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/neoverse_n1/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
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GSL/2.7-GCC-10.3.0
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ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
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nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
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Xvfb/1.20.11-GCCcore-10.3.0
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.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7435

date job status comment
Sep 19 13:37:58 UTC 2023 submitted job id 7435 awaits release by job manager
Sep 19 13:39:00 UTC 2023 released job awaits launch by Slurm scheduler
Sep 19 13:42:29 UTC 2023 running job 7435 is running
Sep 19 15:18:21 UTC 2023 finished
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✅ job output file slurm-7435.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_v1-1695136568.tar.gzsize: 115 MiB (121382493 bytes)
entries: 9463
modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/neoverse_v1/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
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libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
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pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/aarch64/neoverse_v1
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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boegel commented Sep 20, 2023

installation of testthat fails with compiler errors:

../inst/include/testthat/vendor/catch.h:6495:41: error: array bound is not an integer constant before ] token
 6495 |         static char altStackMem[SIGSTKSZ];
      |                                         ^
../inst/include/testthat/vendor/catch.h: In constructor Catch::FatalConditionHandler::FatalConditionHandler():
../inst/include/testthat/vendor/catch.h:6514:30: error: altStackMem was not declared in this scope
 6514 |             sigStack.ss_sp = altStackMem;
      |                              ^~~~~~~~~~~
../inst/include/testthat/vendor/catch.h: At global scope:
../inst/include/testthat/vendor/catch.h:6546:53: error: array bound is not an integer constant before ] token
 6546 |

It looks like this is fixed in r-lib/testthat#1403, see also r-lib/testthat#1373

edit: see also easybuilders/easybuild-easyconfigs#17175 (but that's only for an ancient R easyconfig)

… pre_single_extension hook that replaces SIGSTKSZ with constant value
@boegel boegel force-pushed the 2023.06_2021a_R-4.1.0 branch from a38a5a3 to f3a1f35 Compare September 21, 2023 10:07
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boegel commented Sep 21, 2023

bot: build repo:eessi-2023.06-software arch:x86_64/generic
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_v1

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Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_v1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1
  • handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

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boegel commented Sep 26, 2023

bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_v1

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Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_v1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1
  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

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New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7570

date job status comment
Sep 26 19:27:15 UTC 2023 submitted job id 7570 awaits release by job manager
Sep 26 19:27:45 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 19:28:51 UTC 2023 running job 7570 is running
Sep 26 21:55:34 UTC 2023 finished
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✅ job output file slurm-7570.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_v1-1695765184.tar.gzsize: 115 MiB (121401022 bytes)
entries: 9463
modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
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libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/neoverse_v1/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/aarch64/neoverse_v1
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

@bedroge
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bedroge commented Sep 26, 2023

It's not impossible that there's a relation to a known unfixed bug in EasyBuild here, where the temporary directory used during an installation gets progressively deeper as more installations are being performed, see easybuilders/easybuild-framework#4291.

If it's indeed this bug causing issues here, you should be able to work around it by explicitly setting the EB temp dir. That solved the problem for me with our local installation scripts.

@boegel
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boegel commented Sep 26, 2023

bot: build repo:eessi-2023.06-software arch:x86_64/generic
bot: build repo:eessi-2023.06-software arch:x86_64/intel/haswell
bot: build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512
bot: build repo:eessi-2023.06-software arch:x86_64/amd/zen2
bot: build repo:eessi-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi-2023.06-software arch:aarch64/generic
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_n1

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eessi-bot bot commented Sep 26, 2023

Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi-2023.06-software arch:x86_64/intel/haswell from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/haswell
  • received bot command build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512
  • received bot command build repo:eessi-2023.06-software arch:x86_64/amd/zen2 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/amd/zen2
  • received bot command build repo:eessi-2023.06-software arch:x86_64/amd/zen3 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/amd/zen3
  • received bot command build repo:eessi-2023.06-software arch:aarch64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/generic
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_n1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_n1
  • handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/intel/haswell resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/amd/zen2 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/amd/zen3 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_n1 resulted in:

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7574

date job status comment
Sep 26 20:22:08 UTC 2023 submitted job id 7574 awaits release by job manager
Sep 26 20:23:16 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:26:02 UTC 2023 running job 7574 is running
Sep 27 03:33:19 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7574.out
❌ found message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1695785414.tar.gzsize: 1383 MiB (1450338596 bytes)
entries: 72190
modules under 2023.06/software/linux/x86_64/generic/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
R/4.1.0-foss-2021a.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
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cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
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libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
R/4.1.0-foss-2021a
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/generic
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-haswell for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7576

date job status comment
Sep 26 20:22:14 UTC 2023 submitted job id 7576 awaits release by job manager
Sep 26 20:23:10 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:25:56 UTC 2023 running job 7576 is running
Sep 27 03:30:57 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7576.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-haswell-1695785273.tar.gzsize: 1386 MiB (1454118167 bytes)
entries: 72190
modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
R/4.1.0-foss-2021a.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/intel/haswell/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
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Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
R/4.1.0-foss-2021a
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/intel/haswell
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:35:38 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-haswell-1695785273.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7578

date job status comment
Sep 26 20:22:21 UTC 2023 submitted job id 7578 awaits release by job manager
Sep 26 20:23:05 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:25:54 UTC 2023 running job 7578 is running
Sep 26 23:44:22 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7578.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1695771763.tar.gzsize: 117 MiB (123654764 bytes)
entries: 9463
modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software
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FriBidi/1.0.10-GCCcore-10.3.0
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GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
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nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/intel/skylake_avx512
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen2 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7580

date job status comment
Sep 26 20:22:27 UTC 2023 submitted job id 7580 awaits release by job manager
Sep 26 20:22:58 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:25:48 UTC 2023 running job 7580 is running
Sep 27 02:34:13 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7580.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen2-1695781912.tar.gzsize: 1385 MiB (1452946701 bytes)
entries: 72190
modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
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GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
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NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
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R/4.1.0-foss-2021a.lua
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software under 2023.06/software/linux/x86_64/amd/zen2/software
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Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
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libgit2/1.1.0-GCCcore-10.3.0
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libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
R/4.1.0-foss-2021a
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/amd/zen2
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:34:59 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen2-1695781912.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7582

date job status comment
Sep 26 20:22:34 UTC 2023 submitted job id 7582 awaits release by job manager
Sep 26 20:22:52 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:25:43 UTC 2023 running job 7582 is running
Sep 26 23:04:26 UTC 2023 finished
😢 FAILURE (click triangle for details)
Details
✅ job output file slurm-7582.out
❌ found message matching ERROR:
❌ found message matching FAILED:
❌ found message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen3-1695769349.tar.gzsize: 117 MiB (123646736 bytes)
entries: 9463
modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
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.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture aarch64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7583

date job status comment
Sep 26 20:22:41 UTC 2023 submitted job id 7583 awaits release by job manager
Sep 26 20:22:50 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:25:40 UTC 2023 running job 7583 is running
Sep 27 02:03:02 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7583.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1695779986.tar.gzsize: 1377 MiB (1444818758 bytes)
entries: 72190
modules under 2023.06/software/linux/aarch64/generic/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
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GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
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ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
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pixman/0.40.0-GCCcore-10.3.0.lua
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GSL/2.7-GCC-10.3.0
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.lmod/cache/spiderT.lua
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.lmod/cache/timestamp
Sep 29 07:36:59 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-aarch64-generic-1695779986.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 26, 2023

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_n1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7584

date job status comment
Sep 26 20:22:47 UTC 2023 submitted job id 7584 awaits release by job manager
Sep 26 20:24:31 UTC 2023 released job awaits launch by Slurm scheduler
Sep 26 20:27:40 UTC 2023 running job 7584 is running
Sep 27 02:03:03 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7584.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_n1-1695780002.tar.gzsize: 1378 MiB (1445123203 bytes)
entries: 72190
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.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:33:41 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-aarch64-neoverse_n1-1695780002.tar.gz to S3 bucket succeeded

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boegel commented Sep 28, 2023

  • job 7574 (x86_64-generic): Failed to get data for PR #18761
  • job 7578 (x86_64-intel-skylake_avx512) + job 7582 (x86_64-amd-zen3) + job 7570 (aarch64-neoverse_v1): vague error when installing credentials, worth trying again
Error: package or namespace load failed for credentials:
 .onLoad failed in loadNamespace() for 'credentials', details:
  call: NULL
  error: Program 'git' terminated (timeout reached: 10.00sec)
Error: loading failed
Execution halted
ERROR: loading failed

So, trying again for the 4 failed targets...

@EESSI EESSI deleted a comment from eessi-bot bot Sep 28, 2023
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boegel commented Sep 28, 2023

bot: build repo:eessi-2023.06-software arch:x86_64/generic
bot: build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512
bot: build repo:eessi-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi-2023.06-software arch:aarch64/neoverse_v1

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eessi-bot bot commented Sep 28, 2023

Updates by the bot instance eessi-bot-citc-aws (click for details)
  • received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
  • received bot command build repo:eessi-2023.06-software arch:x86_64/intel/skylake_avx512 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512
  • received bot command build repo:eessi-2023.06-software arch:x86_64/amd/zen3 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:x86_64/amd/zen3
  • received bot command build repo:eessi-2023.06-software arch:aarch64/neoverse_v1 from boegel

    • expanded format: build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1
  • handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:x86_64/amd/zen3 resulted in:

  • handling command build repository:eessi-2023.06-software architecture:aarch64/neoverse_v1 resulted in:

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eessi-bot bot commented Sep 28, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7591

date job status comment
Sep 28 10:49:25 UTC 2023 submitted job id 7591 awaits release by job manager
Sep 28 10:50:30 UTC 2023 released job awaits launch by Slurm scheduler
Sep 28 10:54:46 UTC 2023 running job 7591 is running
Sep 28 17:50:08 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7591.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1695923233.tar.gzsize: 1383 MiB (1451223330 bytes)
entries: 72190
modules under 2023.06/software/linux/x86_64/generic/modules/all
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.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:34:20 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-x86_64-generic-1695923233.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 28, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7592

date job status comment
Sep 28 10:49:31 UTC 2023 submitted job id 7592 awaits release by job manager
Sep 28 10:50:27 UTC 2023 released job awaits launch by Slurm scheduler
Sep 28 10:54:44 UTC 2023 running job 7592 is running
Sep 28 16:32:14 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7592.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1695918597.tar.gzsize: 1387 MiB (1454534452 bytes)
entries: 72190
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.lmod/cache/spiderT.lua
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.lmod/cache/timestamp
Sep 29 07:36:18 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1695918597.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 28, 2023

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7593

date job status comment
Sep 28 10:49:37 UTC 2023 submitted job id 7593 awaits release by job manager
Sep 28 10:50:25 UTC 2023 released job awaits launch by Slurm scheduler
Sep 28 10:54:41 UTC 2023 running job 7593 is running
Sep 28 15:23:10 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7593.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen3-1695914401.tar.gzsize: 1386 MiB (1453596443 bytes)
entries: 72190
modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all
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FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
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ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
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LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
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nodejs/14.17.0-GCCcore-10.3.0.lua
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pixman/0.40.0-GCCcore-10.3.0.lua
R/4.1.0-foss-2021a.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/x86_64/amd/zen3/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
R/4.1.0-foss-2021a
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/x86_64/amd/zen3
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:32:20 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen3-1695914401.tar.gz to S3 bucket succeeded

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eessi-bot bot commented Sep 28, 2023

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_328/7594

date job status comment
Sep 28 10:49:43 UTC 2023 submitted job id 7594 awaits release by job manager
Sep 28 10:50:22 UTC 2023 released job awaits launch by Slurm scheduler
Sep 28 10:54:38 UTC 2023 running job 7594 is running
Sep 28 15:22:01 UTC 2023 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-7594.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-neoverse_v1-1695914330.tar.gzsize: 1378 MiB (1445712758 bytes)
entries: 72190
modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all
cairo/1.16.0-GCCcore-10.3.0.lua
FLAC/1.3.3-GCCcore-10.3.0.lua
FriBidi/1.0.10-GCCcore-10.3.0.lua
Ghostscript/9.54.0-GCCcore-10.3.0.lua
GLPK/5.0-GCCcore-10.3.0.lua
GObject-Introspection/1.68.0-GCCcore-10.3.0.lua
GSL/2.7-GCC-10.3.0.lua
HarfBuzz/2.8.1-GCCcore-10.3.0.lua
ImageMagick/7.0.11-14-GCCcore-10.3.0.lua
libgit2/1.1.0-GCCcore-10.3.0.lua
libogg/1.3.4-GCCcore-10.3.0.lua
libsndfile/1.0.31-GCCcore-10.3.0.lua
libvorbis/1.3.7-GCCcore-10.3.0.lua
LittleCMS/2.12-GCCcore-10.3.0.lua
nettle/3.7.2-GCCcore-10.3.0.lua
NLopt/2.7.0-GCCcore-10.3.0.lua
nodejs/14.17.0-GCCcore-10.3.0.lua
Pango/1.48.5-GCCcore-10.3.0.lua
pixman/0.40.0-GCCcore-10.3.0.lua
R/4.1.0-foss-2021a.lua
Tk/8.6.11-GCCcore-10.3.0.lua
UDUNITS/2.2.28-GCCcore-10.3.0.lua
Xvfb/1.20.11-GCCcore-10.3.0.lua
software under 2023.06/software/linux/aarch64/neoverse_v1/software
cairo/1.16.0-GCCcore-10.3.0
FLAC/1.3.3-GCCcore-10.3.0
FriBidi/1.0.10-GCCcore-10.3.0
Ghostscript/9.54.0-GCCcore-10.3.0
GLPK/5.0-GCCcore-10.3.0
GObject-Introspection/1.68.0-GCCcore-10.3.0
GSL/2.7-GCC-10.3.0
HarfBuzz/2.8.1-GCCcore-10.3.0
ImageMagick/7.0.11-14-GCCcore-10.3.0
libgit2/1.1.0-GCCcore-10.3.0
libogg/1.3.4-GCCcore-10.3.0
libsndfile/1.0.31-GCCcore-10.3.0
libvorbis/1.3.7-GCCcore-10.3.0
LittleCMS/2.12-GCCcore-10.3.0
nettle/3.7.2-GCCcore-10.3.0
NLopt/2.7.0-GCCcore-10.3.0
nodejs/14.17.0-GCCcore-10.3.0
Pango/1.48.5-GCCcore-10.3.0
pixman/0.40.0-GCCcore-10.3.0
R/4.1.0-foss-2021a
Tk/8.6.11-GCCcore-10.3.0
UDUNITS/2.2.28-GCCcore-10.3.0
Xvfb/1.20.11-GCCcore-10.3.0
other under 2023.06/software/linux/aarch64/neoverse_v1
.lmod/cache/spiderT.lua
.lmod/cache/spiderT.luac_5.1
.lmod/cache/timestamp
Sep 29 07:33:00 UTC 2023 uploaded transfer of eessi-2023.06-software-linux-aarch64-neoverse_v1-1695914330.tar.gz to S3 bucket succeeded

@boegel boegel added the ready-to-deploy Mark a PR as ready to deploy label Sep 28, 2023
@bedroge bedroge added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Sep 29, 2023
@bedroge bedroge merged commit ee1e6b0 into EESSI:2023.06 Sep 29, 2023
121 checks passed
@boegel boegel deleted the 2023.06_2021a_R-4.1.0 branch September 29, 2023 13:13
trz42 pushed a commit to trz42/software-layer that referenced this pull request Apr 16, 2024
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