dockstore_test_input.json

{
  "hic.assembly_name": "ce10",
  "hic.chrsz": "https://storage.googleapis.com/dockstore_test_input/hic-pipeline/ce10_selected.chrom.sizes.tsv",
  "hic.fastq": [
    [
      {
        "read_1": "https://storage.googleapis.com/dockstore_test_input/hic-pipeline/merged_read1.fastq.gz",
        "read_2": "https://storage.googleapis.com/dockstore_test_input/hic-pipeline/merged_read2.fastq.gz"
      }
    ]
  ],
  "hic.no_call_loops": true,
  "hic.no_call_tads": true,
  "hic.no_delta": true,
  "hic.no_slice": true,
  "hic.reference_index": "https://storage.googleapis.com/dockstore_test_input/hic-pipeline/ce10_selected.tar.gz",
  "hic.restriction_enzymes": [
    "MboI"
  ],
  "hic.restriction_sites": "https://storage.googleapis.com/dockstore_test_input/hic-pipeline/ce10_selected_MboI.txt.gz"
}