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Allow fix_file
to return Cube
and CubeList
objects
#2579
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schlunma
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Enable lock sharing between ncdata and Iris Suppress load warnings Restore lat/lon coord units after load All fixes in fix_file
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #2579 +/- ##
==========================================
+ Coverage 94.93% 94.96% +0.02%
==========================================
Files 252 252
Lines 14620 14666 +46
==========================================
+ Hits 13880 13927 +47
+ Misses 740 739 -1 ☔ View full report in Codecov by Sentry. |
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Description
Currently, if a file cannot be properly read with Iris, we use
fix_file
to create a copy of that file and modify it usingnetCDF4.Dataset
(example). This is very inefficient and slow.A much better way to deal with this is to read the file with ncdata or xarray and then use ncdata to convert that object to an Iris object. However, for this to work, we need to allow
fix_file
to return Iris objects (instead of paths) andload
to read Iris objects (instead of paths). This PR does that.It also provides a convenience function
dataset_to_iris
that allows to convert an xarray or ncdata object to an Iris object very similar to ourload
function.Closes #2129
Related to #674
Link to documentation:
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All checks below this pull request were successfulRemaining Codacy issues cannot be fixedTo help with the number pull requests: