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ETHZ-INS

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  1. DLCAnalyzer DLCAnalyzer Public

    R Scripts to analyze deep lab cut point data and related data

    R 61 16

  2. BehaviorFlow BehaviorFlow Public

    Code package that allows meta analyses of unsupervised behavior results

    R 14 1

  3. scanMiR scanMiR Public

    A set of tools for scanning for miRNA binding sites and working with affinity models

    R 6 2

  4. diffUTR diffUTR Public

    The diffUTR R package streamlines differential exon usage (DEU) analyses, and leverages existing DEU tools and alternative poly-adenylation site databases to enable differential 3' UTR usage analysis.

    R 6 1

  5. enrichMiR enrichMiR Public

    miRNA target enrichment analysis

    R 4 1

  6. pupillometry pupillometry Public

    A shiny app for pupillometry data analysis

    R 2

Repositories

Showing 10 of 25 repositories
  • diffUTR Public

    The diffUTR R package streamlines differential exon usage (DEU) analyses, and leverages existing DEU tools and alternative poly-adenylation site databases to enable differential 3' UTR usage analysis.

    ETHZ-INS/diffUTR’s past year of commit activity
    R 6 1 1 1 Updated Oct 30, 2024
  • epiwraps Public

    Wrappers for dealing and plotting with epigenomics data

    ETHZ-INS/epiwraps’s past year of commit activity
    R 2 GPL-3.0 1 0 0 Updated Oct 24, 2024
  • DTFAB Public

    Benchmark of methods for Differential TF activity from ATAC-seq data

    ETHZ-INS/DTFAB’s past year of commit activity
    R 1 0 0 0 Updated Oct 14, 2024
  • BehaviorFlow Public

    Code package that allows meta analyses of unsupervised behavior results

    ETHZ-INS/BehaviorFlow’s past year of commit activity
    R 14 GPL-3.0 1 1 0 Updated Aug 27, 2024
  • enrichMiR Public

    miRNA target enrichment analysis

    ETHZ-INS/enrichMiR’s past year of commit activity
    R 4 1 1 0 Updated Jul 17, 2024
  • scanMiR Public

    A set of tools for scanning for miRNA binding sites and working with affinity models

    ETHZ-INS/scanMiR’s past year of commit activity
    R 6 GPL-3.0 2 0 0 Updated Jul 16, 2024
  • ethEpigen2024_materials Public

    Materials for the 2024 ETH course "Bioinformatic approaches to regulatory genomics and epigenomics"

    ETHZ-INS/ethEpigen2024_materials’s past year of commit activity
    HTML 0 GPL-3.0 18 0 0 Updated May 31, 2024
  • scanMiRApp Public

    Shiny app (and further functionalities) for scanMiR

    ETHZ-INS/scanMiRApp’s past year of commit activity
    R 0 0 3 0 Updated Mar 13, 2024
  • Privitera-et.-al.-2023 Public

    Effects of different NA modulations on the acute stress response

    ETHZ-INS/Privitera-et.-al.-2023’s past year of commit activity
    R 1 0 0 0 Updated Mar 1, 2024
  • ethEpigen2023_materials Public

    Materials for the 2023 ETH course "Bioinformatic approaches to regulatory genomics and epigenomics"

    ETHZ-INS/ethEpigen2023_materials’s past year of commit activity
    HTML 2 GPL-3.0 26 0 0 Updated Feb 11, 2024
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