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small bug fixes
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pchaumeil committed Apr 3, 2018
2 parents a0549f5 + 96b0e1f commit 106d387
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Expand Up @@ -25,8 +25,8 @@ GTDB-Tk makes use of the following 3rd party dependencies and assumes these are
* [FastANI](https://github.com/ParBLiSS/FastANI) >= 1.0: Jain C, et al. 2017. High-throughput ANI Analysis of 90K Prokaryotic Genomes Reveals Clear Species Boundaries.<i>bioRxiv.</i> 256800.
* [FastTree](http://www.microbesonline.org/fasttree/) >= 2.1.9: Price MN, et al. 2010 FastTree 2 -- Approximately Maximum-Likelihood Trees for Large Alignments. <i>PLoS ONE</i>, 5, e9490.

GTDB-Tk also assumes the Python 2.7.x and Perl interpreters are on your system path.
_NOTE_ :Perl interpreter requires Moose and IPC::Run modules. You need to make sure that the folder where perl modules (*.pm) are located is part the @inc variable.
GTDB-Tk also assumes the Python 2.7.x and Perl interpreters are on your system path.
_NOTE_ :Perl interpreter requires Moose and IPC::Run modules. You need to make sure that the folder where perl modules (*.pm) are located is part the @inc variable.
If it is not , you can set the PERL5LIB ( or PERLIB) environment variable the same way you set PATH environment variable. Every directory listed in this variable will be added to @inc.
i.e:
```
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