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EvolEcolGroup · Oct 19, 2024 · d55762f · d55762f
1 parent 79d9e88
commit d55762f
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diff --git a/.github/workflows/vcf-check.yaml b/.github/workflows/vcf-check.yaml
@@ -68,4 +68,5 @@ jobs:
             } else {
               message("all is well)")
             }
+            devtools::test()
         shell: Rscript {0}
diff --git a/R/vcf_to_fbm_cpp.R b/R/vcf_to_fbm_cpp.R
@@ -91,6 +91,9 @@ vcf_to_fbm_cpp <- function(
   #   index_start:(index_start+chunk_info$num_loci-1)
   # ] <- genotypes_matrix[,1:chunk_info$num_loci]
 
+  # debug
+  print(genotypes_matrix)
+
   write_to_FBM(file_backed_matrix,
                allele_counts = genotypes_matrix,
                col_start = index_start-1,