C++/Python FEniCS/dolfinx@298f5f0

FEniCS · Nov 15, 2024 · 7249648 · 7249648
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diff --git a/dolfinx/main/cpp/demos/demo_biharmonic.html b/dolfinx/main/cpp/demos/demo_biharmonic.html
@@ -136,8 +136,8 @@ <h3>Weak formulation<a class="headerlink" href="#weak-formulation" title="Link t
 \forall \ K \in \mathcal{T} \right\}
 \]</div>
 <p>and considering the boundary conditions</p>
-<div class="amsmath math notranslate nohighlight" id="equation-1125d635-100a-4f86-a578-cda74b7276d4">
-<span class="eqno">(1)<a class="headerlink" href="#equation-1125d635-100a-4f86-a578-cda74b7276d4" title="Permalink to this equation"></a></span>\[\begin{align}
+<div class="amsmath math notranslate nohighlight" id="equation-d7cb6ec5-e6c7-4b98-9d50-f08c488ff825">
+<span class="eqno">(1)<a class="headerlink" href="#equation-d7cb6ec5-e6c7-4b98-9d50-f08c488ff825" title="Permalink to this equation"></a></span>\[\begin{align}
 u &amp;= 0 \quad {\rm on} \ \partial\Omega, \\
 \nabla^{2} u &amp;= 0 \quad {\rm on} \ \partial\Omega,
 \end{align}\]</div>

diff --git a/...nx/main/python/_downloads/9561cf6cd1a70079b986f4eb31580cbd/demo_poisson_matrix_free.ipynb b/...nx/main/python/_downloads/9561cf6cd1a70079b986f4eb31580cbd/demo_poisson_matrix_free.ipynb
@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "markdown",
-   "id": "3191ec18",
+   "id": "d3a49a9b",
    "metadata": {},
    "source": [
     "# Matrix-free conjugate gradient solver for the Poisson equation\n",
@@ -72,7 +72,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "84bc3408",
+   "id": "8bfdff63",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -82,7 +82,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "07b0d6bc",
+   "id": "084bc6d6",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -92,7 +92,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "73beaab9",
+   "id": "b9789a04",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -104,7 +104,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "8e23f975",
+   "id": "72486968",
    "metadata": {},
    "source": [
     "We begin by using {py:func}`create_rectangle\n",
@@ -117,7 +117,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "dd8845f5",
+   "id": "7f44d708",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -130,7 +130,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "8ec91826",
+   "id": "b60a2fe5",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -141,7 +141,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "f8befbac",
+   "id": "58bd4345",
    "metadata": {},
    "source": [
     "The second argument to {py:class}`functionspace\n",
@@ -160,7 +160,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "e1681538",
+   "id": "c9711735",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -171,7 +171,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "9ab4f97a",
+   "id": "be539179",
    "metadata": {},
    "source": [
     "We now find the degrees of freedom that are associated with the boundary\n",
@@ -182,7 +182,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "828cfecc",
+   "id": "c46cd099",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -191,7 +191,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "1b3f6ce4",
+   "id": "833014b2",
    "metadata": {},
    "source": [
     "and use {py:func}`dirichletbc <dolfinx.fem.dirichletbc>` to define the\n",
@@ -204,7 +204,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "93131540",
+   "id": "ed378695",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -215,7 +215,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "01aa6d42",
+   "id": "b81f2662",
    "metadata": {},
    "source": [
     "Next, we express the variational problem using UFL."
@@ -224,7 +224,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "d7828bad",
+   "id": "c7f34588",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -239,7 +239,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "8289288b",
+   "id": "b2104a6e",
    "metadata": {},
    "source": [
     "For the matrix-free solvers we also define a second linear form `M` as\n",
@@ -255,7 +255,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "403cce4c",
+   "id": "a61d6a7b",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -266,7 +266,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "307b3fe4",
+   "id": "f27a0949",
    "metadata": {},
    "source": [
     "### Matrix-free conjugate gradient solver\n",
@@ -280,7 +280,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "960a881e",
+   "id": "815055f7",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -295,7 +295,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "cd6b2778",
+   "id": "19d8fb7e",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -306,7 +306,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "5eb8f258",
+   "id": "40cdb523",
    "metadata": {
     "lines_to_next_cell": 2
    },
@@ -318,7 +318,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "a723f41a",
+   "id": "da5be6c5",
    "metadata": {
     "lines_to_next_cell": 2
    },
@@ -341,7 +341,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "4064d31c",
+   "id": "5be3a808",
    "metadata": {
     "lines_to_next_cell": 2
    },
@@ -357,7 +357,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "f7147d82",
+   "id": "b9269c01",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -403,7 +403,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "8bf5c788",
+   "id": "047ea087",
    "metadata": {},
    "source": [
     "This matrix-free solver is now used to compute the finite element solution.\n",
@@ -414,7 +414,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "e68ea075",
+   "id": "5fd3ea85",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -426,7 +426,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "c5756c39",
+   "id": "f091ed71",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -437,7 +437,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "65b13ba3",
+   "id": "1bfcdccc",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -449,7 +449,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "8e63ae28",
+   "id": "995dce2d",
    "metadata": {},
    "outputs": [],
    "source": [

diff --git a/dolfinx/main/python/_downloads/9ed4657d08dda04de30e6463e2f58d75/demo_mixed-poisson.ipynb b/dolfinx/main/python/_downloads/9ed4657d08dda04de30e6463e2f58d75/demo_mixed-poisson.ipynb
@@ -2,15 +2,15 @@
  "cells": [
   {
    "cell_type": "markdown",
-   "id": "2b4055aa",
+   "id": "bb323bc9",
    "metadata": {},
    "source": [
     "# Mixed formulation for the Poisson equation"
    ]
   },
   {
    "cell_type": "markdown",
-   "id": "73a2ae48",
+   "id": "c331a722",
    "metadata": {},
    "source": [
     "This demo illustrates how to solve Poisson equation using a mixed\n",
@@ -22,7 +22,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "fa02d3f9",
+   "id": "564e5647",
    "metadata": {},
    "source": [
     "```{admonition} Download sources\n",
@@ -103,7 +103,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "eca194ef",
+   "id": "c1cecfd6",
    "metadata": {},
    "outputs": [],
    "source": [

diff --git a/dolfinx/main/python/_modules/dolfinx/io/gmshio.html b/dolfinx/main/python/_modules/dolfinx/io/gmshio.html
@@ -322,7 +322,7 @@ <h1>Source code for dolfinx.io.gmshio</h1><div class="highlight"><pre>
 <span class="sd">    Note:</span>
 <span class="sd">        For performance, this function should only be called once for</span>
 <span class="sd">        large problems. For re-use, it is recommended to save the mesh</span>
-<span class="sd">        and corresponding tags using :class:`dolfinxio.XDMFFile` after</span>
+<span class="sd">        and corresponding tags using :class:`dolfinx.io.XDMFFile` after</span>
 <span class="sd">        creation for efficient access.</span>
 
 <span class="sd">    &quot;&quot;&quot;</span>

diff --git a/dolfinx/main/python/generated/dolfinx.io.gmshio.html b/dolfinx/main/python/generated/dolfinx.io.gmshio.html
@@ -214,7 +214,7 @@
 <p class="admonition-title">Note</p>
 <p>For performance, this function should only be called once for
 large problems. For re-use, it is recommended to save the mesh
-and corresponding tags using <code class="xref py py-class docutils literal notranslate"><span class="pre">dolfinxio.XDMFFile</span></code> after
+and corresponding tags using <a class="reference internal" href="dolfinx.io.html#dolfinx.io.XDMFFile" title="dolfinx.io.XDMFFile"><code class="xref py py-class docutils literal notranslate"><span class="pre">dolfinx.io.XDMFFile</span></code></a> after
 creation for efficient access.</p>
 </div>
 </dd></dl>

diff --git a/dolfinx/main/python/searchindex.js b/dolfinx/main/python/searchindex.js