factor: remove native pipe - fix #45

FRBCesab · Feb 12, 2024 · efd7f09 · efd7f09
1 parent ae6269a
commit efd7f09
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Showing 7 changed files with 11 additions and 18 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -34,8 +34,7 @@ Encoding: UTF-8
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.1
 VignetteBuilder: knitr
-Depends: 
-    R (>= 4.1.0)
+Depends: R (>= 2.10)
 Imports: 
     dplyr,
     ggplot2,

diff --git a/R/read_cpr_north_data.R b/R/read_cpr_north_data.R
@@ -76,8 +76,6 @@ read_cpr_north_data <- function(path = ".",
     data <- data.frame("data_type" = "CPR North", data)
   }
 
-
-  data |> 
-    dplyr::mutate(dplyr::across(.data$count_bin_min:.data$count_bin_max, 
-                                as.numeric))
+  dplyr::mutate(data, dplyr::across(.data$count_bin_min:.data$count_bin_max, 
+                                    as.numeric))
 }
diff --git a/R/read_cpr_south_data.R b/R/read_cpr_south_data.R
@@ -79,6 +79,5 @@ read_cpr_south_data <- function(path = ".",
 
   taxa_columns <- get_species_names(data)
 
-  data |> 
-    dplyr::mutate(dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
+  dplyr::mutate(data, dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
 }
diff --git a/R/read_plankton_nets_data.R b/R/read_plankton_nets_data.R
@@ -109,6 +109,5 @@ read_plankton_nets_data <- function(
 
   taxa_columns <- get_species_names(data)
 
-  data |> 
-    dplyr::mutate(dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
+  dplyr::mutate(data, dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
 }
diff --git a/R/read_pump_data.R b/R/read_pump_data.R
@@ -79,6 +79,5 @@ read_pump_data <- function(path = ".",
 
   taxa_columns <- get_species_names(data)
 
-  data |> 
-    dplyr::mutate(dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
+  dplyr::mutate(data, dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
 }
diff --git a/R/read_sediment_trap_data.R b/R/read_sediment_trap_data.R
@@ -79,6 +79,5 @@ read_sediment_trap_data <- function(
 
   taxa_columns <- get_species_names(data)
 
-  data |> 
-    dplyr::mutate(dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
+  dplyr::mutate(data, dplyr::across(dplyr::all_of(taxa_columns), as.numeric))
 }
diff --git a/codemeta.json b/codemeta.json
@@ -4,7 +4,7 @@
   "identifier": "forcis",
   "description": "Provides an interface to the FORCIS database on global foraminifera distribution. This package allows to download and to handle FORCIS data. It is part of the FRB-CESAB working group FORCIS. <https://www.fondationbiodiversite.fr/en/the-frb-in-action/programs-and-projects/le-cesab/forcis/>.",
   "name": "forcis: An R Client to Access the FORCIS Database",
-  "codeRepository": "https://github.com/FRBCesab/forcis",
+  "codeRepository": "https://github.com/frbcesab/forcis",
   "issueTracker": "https://github.com/FRBCesab/forcis/issues",
   "license": "https://spdx.org/licenses/GPL-2.0",
   "version": "0.0.0.9000",
@@ -93,7 +93,7 @@
       "@type": "SoftwareApplication",
       "identifier": "R",
       "name": "R",
-      "version": ">= 4.1.0"
+      "version": ">= 2.10"
     },
     "2": {
       "@type": "SoftwareApplication",
@@ -186,7 +186,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "1059.228KB",
+  "fileSize": "1063.112KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",
@@ -423,7 +423,7 @@
     }
   ],
   "relatedLink": "https://frbcesab.github.io/forcis",
-  "releaseNotes": "https://github.com/FRBCesab/forcis/blob/master/NEWS.md",
+  "releaseNotes": "https://github.com/frbcesab/forcis/blob/master/NEWS.md",
   "readme": "https://github.com/FRBCesab/forcis/blob/master/README.md",
   "contIntegration": ["https://github.com/FRBCesab/forcis/actions/workflows/R-CMD-check.yaml", "https://github.com/FRBCesab/forcis/actions/workflows/pkgdown.yaml"]
 }