Wilson Only Looks Once - official GitHub repo, containing data parsing and generation files, links to all used datasets and training as well as evaluation routines.
by Fabian Plum & David Labonte
rendered image of synthetic leafcutter ant colony, digitised using scAnt, rigged and rendered in Blender, synthetic datasets generated with replicAnt in Unreal Engine
This repo and page are a work in progress and will be continuously updated as Fabi attempts to submit his PhD thesis by the end of the year.
WOLO data can then be integrated with OmniTrax estimates for combined tracking / pose / size estimation:
Generated from 3D models of specimens digitised with the latest build of scAnt.
The following samples are part of the datasets used to train detection, regressor, and classifier networks, and have been generated with replicAnt - generating annotated images of animals in complex environments with Unreal Engine.
 |
 |
 |
 |
 |
 |
 |
 |
 |
- 3D Models 10.5281/zenodo.11167946
- Datasets 10.5281/zenodo.11167521
When using WOLO datasets and models or our other projects in your work, please make sure to cite them:
@article{Plum2024B,
author = {Plum, Fabian and Plum, Lena and Bischoff, Corvin and Labonte, David},
title = {WOLO: Wilson Only Looks Once {\textendash} Estimating ant body mass from reference-free images using deep convolutional neural networks},
elocation-id = {2024.05.15.594277},
year = {2024},
doi = {10.1101/2024.05.15.594277},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2024/05/17/2024.05.15.594277},
journal = {bioRxiv}}
@article{PlumLabonte2021,
title = {scAnt — An open-source platform for the creation of 3D models of arthropods (and other small objects)},
author = {Plum, Fabian and Labonte, David},
doi = {10.7717/peerj.11155},
issn = {21678359},
journal = {PeerJ},
keywords = {3D,Digitisation,Macro imaging,Morphometry,Photogrammetry,Zoology},
volume = {9},
year = {2021}}
@article{Plum2024,
title = {OmniTrax: A deep learning-driven multi-animal tracking and pose-estimation add-on for Blender},
doi = {10.21105/joss.05549},
url = {https://doi.org/10.21105/joss.05549},
year = {2024}, publisher = {The Open Journal},
volume = {9}, number = {95}, pages = {5549},
author = {Fabian Plum},
journal = {Journal of Open Source Software}}
@article{Plum2023,
title = {replicAnt: a pipeline for generating annotated images of animals in complex environments using Unreal Engine},
author = {Plum, Fabian and Bulla, René and Beck, Hendrik K and Imirzian, Natalie and Labonte, David},
doi = {10.1038/s41467-023-42898-9},
issn = {2041-1723},
journal = {Nature Communications},
url = {https://doi.org/10.1038/s41467-023-42898-9},
volume = {14},
year = {2023}}
Pull requests are warmly welcome. For major changes, please open an issue first to discuss what you would like to change.
© Fabian Plum, David Labonte 2023 MIT License