You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
We currently don't seem to have a description of the context specific methylation totals in the new (and awesome) docs. More information on the report are here.
The text was updated successfully, but these errors were encountered:
Just as a reminder, the report looks at 2 bases downstream, as well as 1 base upstream of the C taking part in the methylation call. This is useful for looking at methylation in specific contexts (e.g. CpA only), and also when using GpC methylases that introduce methylation in GpC context
upstream C-context full context count methylated count unmethylated percent methylation
A CAA ACAA 308398 93360 23.24
C CAA CCAA 329555 75518 18.64
G CAA GCAA 242262 118175 32.79
T CAA TCAA 302209 86219 22.20
A CAC ACAC 266786 91121 25.46
C CAC CCAC 409749 89154 17.87
...
We currently don't seem to have a description of the context specific methylation totals in the new (and awesome) docs. More information on the report are here.
The text was updated successfully, but these errors were encountered: