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  1. rnaseq-DEPRECATED rnaseq-DEPRECATED Public archive

    Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR and Salmon with gene counts and quality control

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  2. 16s-metagenomics-manual 16s-metagenomics-manual Public

  3. wastewaters-manual wastewaters-manual Public

  4. rnaseq-FlomicsQC-manual rnaseq-FlomicsQC-manual Public

    Manual

  5. differentialabundance-DEPRECATED differentialabundance-DEPRECATED Public archive

    Forked from nf-core/differentialabundance

    Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

  6. sarek-DEPRECATED sarek-DEPRECATED Public archive

    Forked from nf-core/sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

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