RCA, short for Reference Component Analysis, is an R package for robust clustering analysis of single cell RNA sequencing data (scRNAseq). It is developed by Prabhakar Group at Genome Institute of Singapore (GIS).
Version 1.0
Release date: March 20, 2017
Features:
- clustering analysis of scRNAseq data from Human samples
- three modes :
- "GlobalPanel": default option for clusterig general single cell data sets that include a wide spectrum of cell types.
- "ColonEpitheliumPanel": suitable for analyzing human colon/intestine derived samples.
- "SelfProjection": suitable for analyzing data sets from not-well-studied tissue types (still under optimization)