Fix buffer without overlap (#630) #474
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# This workflow will install Python dependencies, run tests and lint with a single version of Python | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: build | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
test: | |
name: ${{ matrix.os }}, python ${{ matrix.python-version }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: ["ubuntu-latest", "macos-latest"] | |
python-version: ["3.10", "3.11", "3.12"] | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
# We initiate the environment empty, and check if a key for this environment doesn't already exist in the cache | |
- name: Initiate empty environment | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
miniforge-version: latest | |
auto-update-conda: true | |
use-mamba: true | |
channel-priority: strict | |
activate-environment: geoutils-dev | |
python-version: | |
- name: Get month for resetting cache | |
id: get-date | |
run: echo "cache_date=$(/bin/date -u '+%Y%m')" >> $GITHUB_ENV | |
shell: bash | |
- name: Cache conda env | |
uses: actions/cache@v4 | |
with: | |
path: ${{ env.CONDA }}/envs | |
key: conda-${{ matrix.os }}-${{ matrix.python-version }}-${{ env.cache_date }}-${{ hashFiles('dev-environment.yml') }}-${{ env.CACHE_NUMBER }} | |
env: | |
CACHE_NUMBER: 0 # Increase this value to reset cache if environment.yml has not changed | |
id: cache | |
# The trick below is necessary because the generic environment file does not specify a Python version, and ONLY | |
# "conda env update" CAN BE USED WITH CACHING, which upgrades the Python version when using the base environment | |
# (we add "graphviz" from dev-environment to solve all dependencies at once, at graphviz relies on image | |
# processing packages very much like geo-packages; not a problem for docs, dev installs where all is done at once) | |
- name: Install base environment with a fixed Python version | |
if: steps.cache.outputs.cache-hit != 'true' | |
run: | | |
mamba install pyyaml python=${{ matrix.python-version }} | |
python .github/scripts/generate_yml_env_fixed_py.py --pyv ${{ matrix.python-version }} --add "graphviz" "environment.yml" | |
mamba env update -n geoutils-dev -f environment-ci-py${{ matrix.python-version }}.yml | |
- name: Install project | |
run: pip install -e . --no-dependencies | |
- name: Check import works with base environment | |
run: python -c "import geoutils" | |
# This time, the trick below is necessary because: 1/ "conda update" does not support a file -f as argument | |
# and also 2/ "conda env update" does not support --freeze-installed or --no-update-deps | |
- name: Update environment with development packages if cache does not exist | |
if: steps.cache.outputs.cache-hit != 'true' | |
run: | | |
pkgs_conda_dev=`python -c "import geoutils; geoutils.misc.diff_environment_yml('environment.yml', 'dev-environment.yml', 'conda')"` | |
pkgs_pip_dev=`python -c "import geoutils; geoutils.misc.diff_environment_yml('environment.yml', 'dev-environment.yml', 'pip')"` | |
mamba install $pkgs_conda_dev --freeze-installed | |
if [[ "$pkgs_pip_dev" != "None" ]]; then | |
pip install --user $pkgs_pip_dev | |
fi | |
# Stop the build if there are Python syntax errors or undefined names | |
- name: Lint with flake8 | |
run: | | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Setup pip dependencies | |
run: pip install pytest-cov coveralls coveragepy-lcov 'coverage<7' | |
- name: Print conda environment (for debugging) | |
run: | | |
conda info | |
conda list | |
- name: Test with pytest | |
run: pytest -ra --cov=geoutils/ | |
- name: Converting coverage to LCOV format | |
run: coveragepy-lcov --data_file_path .coverage --output_file_path coverage.info | |
- name: Upload coverage to Coveralls | |
uses: coverallsapp/github-action@master | |
with: | |
github-token: ${{ secrets.github_token }} | |
flag-name: run-${{ matrix.test_number }} | |
path-to-lcov: coverage.info | |
parallel: true | |
finish: | |
needs: test | |
runs-on: ubuntu-latest | |
steps: | |
- name: Upload to Coveralls finished | |
uses: coverallsapp/github-action@master | |
with: | |
github-token: ${{ secrets.github_token }} | |
parallel-finished: true |