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Merge issue 839 develop PRs to hdf5 1 10 - round 3 (#853)
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* Revert addition of & to 2 parameters in DSetCreatPropList::setVirtual to
maintain binary compatibility.

* Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

* Removes gratuitous (double)x.yF casts (#632)

* Committing clang-format changes

* Removes gratuitous (double)x.yF casts

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Cleans up a const warning left over from previous constification (#633)

* Committing clang-format changes

* Adds consts to a few global variables

* Cleans up a const warning left over from previous constification

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Purges UFAIL from the library (#637)

* Committing clang-format changes

* Purges UFAIL from the library

* H5HL_insert change requested in PR

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Bmr dev hdffv 11223 (#640)

* Fixed HDFFV-11223 (CVE-2018-14460)

Description
    - Added checks against buffer size to prevent segfault, in case of data
      corruption, for sdim->size and sdim->max.
    - Renamed data files in an existing test to shorten their length
      as agreed with other developers previously.
Platforms tested:
    Linux/64 (jelly)

* Committing clang-format changes

* Updated for test files

* Updated for HDFFV-11223

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Committing clang-format changes

* Restore "error:" in line 2666.

* Revert "Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)"

This reverts commit 426b50484841118cf633fd6147302a63a30fd746.

* Snapshot version 1.10 release 8-1. Update version to 1.10.8-2.

Squashed commit of the following:

commit 60734e63fe077238f10de3d6ca8f037f9a42af89
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Thu Jun 24 14:20:39 2021 -0500

    Hdf5 1 10 Fix tools test (#796)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    * Merge warnings files fixes from develop

    * Fix cmake configure path

    * Update missing release note info.

    * Update code owners

    * Add known problem

    * Use only core library for testing dynamic plugins.

    CMake uses H5_HAVE_DIRECT instead of DIRECT_VFD

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit bfb780a4441e4ef43dd23708d415e5e3b84800f4
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Wed Jun 23 14:11:46 2021 -0500

    Hdf5 1 10 Release Note (#786)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    * Merge warnings files fixes from develop

    * Fix cmake configure path

    * Update missing release note info.

    * Update code owners

    * Add known problem

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit 9f5040736868f8eec584ab5af6d2a77e4d45ae30
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Tue Jun 22 07:03:26 2021 -0500

    Hdf5 1 10 Update missing release note info. (#778)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    * Merge warnings files fixes from develop

    * Fix cmake configure path

    * Update missing release note info.

    * Update code owners

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit 2e80c9cdec98d6cee5b4609643839a4ad2a848fb
Author: Dana Robinson <43805+derobins@users.noreply.github.com>
Date:   Fri Jun 18 06:42:23 2021 -0700

    Brings hash table IDs feature from develop/1.12 (#768)

    * Brings updated tid test from develop

    * Adds empty H5Iint.c and H5Idbg.c files

    * H5I renaming to match 1.12/develop

    * Splits off H5I debug code to H5Idbg.c

    * Splits internal H5I.c functionality to H5Iint.c

    * Header cleanup

    * More renaming cleanup to match develop/1.12

    * Adds "save last ID" optimization

    * Adds uthash.h

    * Adds hash table IDs from develop/1.12

    * Committing clang-format changes

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit 1e29bcbfe24956f0158b3363a3fbb8a42c8e7e0f
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Thu Jun 17 11:21:43 2021 -0500

    Hdf5 1 10 Fix cmake configure path (#762)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    * Merge warnings files fixes from develop

    * Fix cmake configure path

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit 475cdaf431c9ef5bfef6243dbc26d0005d08c49d
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Wed Jun 16 15:45:58 2021 -0500

    Hdf5 1 10 merge warnings changes (#756)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    * Merge warnings files fixes from develop

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit e25980e7f35b8508db90648409ba80ee36d61c9e
Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Date:   Tue Jun 8 14:37:13 2021 -0500

    Hdf5 1 10 merges of CMake changes (#738)

    * HDFFV-10865 - merge from dev, HDFArray perf fix.

    * Remove duplicate setting

    * Whitespace changes after clang format

    * Undo version 11 clang format changes

    * Merge CMake changes from develop

    * test testing script merge from develop

    * Update supported platforms

    * PR#3 merge from develop

    * Merge gcc 10 diagnostics option from develop

    * Merge #318 OSX changes from develop

    * Merge small changes from develop

    * Minor non-space formatting changes

    * #386 copyright corrections for java folder

    * Merges from develop

    #358 patches from vtk
    #361 fix header guard spelling

    * Merge updates

    #358 patches from vtk
    #361 fix header guard spelling

    * format fix

    * Fix missing underscore and make H5public.h closer to dev

    * Merges from develop

    #340 clang -Wformat-security warnings
    #360 Fixed uninitialized warnings
    header guard underscore cleanup
    JNI cleanup

    * format alignment

    * Add missing test ref file

    * Merge #380 from develop

    * Finish java merges from develop

    * Fix java issues with tests and javadoc

    * Correct use of attribute access plist

    * Remove debug code

    * Remove unused variable

    * Change file access to read only for java tests

    * Split clang format operations.

    * More javadoc comments

    * Remove pre-split setting

    * format source

    * Change windows TS to use older VS.

    * Mostly all javadoc fixes, one argument rename.

    * synch file

    * Merge of long double fix and compiler flags

    * HDFFV-11229 merge changes from develop

    * HDFFV-11229 correct test script

    * HDFFV-11229 update autotools test script for two ref files

    * HDFFV-11229 merge dev changes for long double display in tools

    * Committing clang-format changes

    * minor whitespace

    * remove unneeded macro

    * Committing clang-format changes

    * Add "option" command for clang options

    * Rework CMake add_custom to use the BYPRODUCTS argument

    Update pkgconfig scripts for parallel builds.
    Fix install COPYING file reference.
    Remove unused round defines.
    Change CMake default setting of BUILD_CPP to off.

    * Fortran target depends

    * Remove incorrect source attribute

    * Revert define removal

    * printf specifiers and VS2015 min changes

    * Committing clang-format changes

    * Add time struct

    * TRILAB-227 and tools debug merges from develop

    * Merge various changes from dev

    * Issue #669 remove version from pkgcfg filename

    * remove version from h5cc script

    * doxygen changes merged from develop

    * Committing clang-format changes

    * Merge CMake fortran ninja changes from dev

    * Enable fortran to gcc yaml

    * Refactor Fortran CMake config tests and CMake test args

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

commit 061b23ac0011d3a26f660a7f4d07c40f41d63f10
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Jun 3 16:07:23 2021 -0500

    Partial merge issue #642 develop branch PRs to Hdf5 1 10 (#718)

    * Revert addition of & to 2 parameters in DSetCreatPropList::setVirtual to
    maintain binary compatibility.

    * Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

    * Removes gratuitous (double)x.yF casts (#632)

    * Committing clang-format changes

    * Removes gratuitous (double)x.yF casts

    * Committing clang-format changes

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Cleans up a const warning left over from previous constification (#633)

    * Committing clang-format changes

    * Adds consts to a few global variables

    * Cleans up a const warning left over from previous constification

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Purges UFAIL from the library (#637)

    * Committing clang-format changes

    * Purges UFAIL from the library

    * H5HL_insert change requested in PR

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Bmr dev hdffv 11223 (#640)

    * Fixed HDFFV-11223 (CVE-2018-14460)

    Description
        - Added checks against buffer size to prevent segfault, in case of data
          corruption, for sdim->size and sdim->max.
        - Renamed data files in an existing test to shorten their length
          as agreed with other developers previously.
    Platforms tested:
        Linux/64 (jelly)

    * Committing clang-format changes

    * Updated for test files

    * Updated for HDFFV-11223

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Committing clang-format changes

    * Restore "error:" in line 2666.

    * Revert "Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)"

    This reverts commit 426b50484841118cf633fd6147302a63a30fd746.

    Co-authored-by: jhendersonHDF <jhenderson@hdfgroup.org>
    Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
    Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

* (fix) Segmentation fault when using a compound type. (#143)

* (fix) Segmentation fault when using a compound type.

In the case when a compounded attribute is written to dataset
followed by writing the data with a data transform function
to the dataset will result in a segmentation fault. It turns out
the data is classified as compounded while it is not. Now, the
state is always reset first to not compounded followed by the
existing check if the variable is compounded.

* (fix) Removed undesired comment lines.

* (fix) Segmentation fault when using a compound type: added test.

* (fix) Added the missing cmpd_transform.c file to MANIFEST.

* (fix) cmpd_dtransform test: autotools and source header.

Added the cmp_dtransform test to the autotools configuration and
updated the HDF Group copyright header.

Co-authored-by: Jan-Willem Blokland <Jan-Willem.Blokland@Shell.com>

* (fix) H5Z_xform_create function and scientific notation (#144)

* (fix) H5Z_xform_create function and scientific notation

Implemented a more sophisticated check to support scientific notation
in the expression of the H5Zset_data_transform function.

* (fix) H5Z_xform_create and scientific notation: Added test.

Added a test to demonstrate that the parsing of expression
which includes scientific notation works correctly. Improved
inline comment.

Co-authored-by: Jan-Willem Blokland <Jan-Willem.Blokland@Shell.com>

* Adds const to a few global variables (#623)

* Committing clang-format changes

* Adds consts to a few global variables

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Made private my_yyinput function static (#618)

This prevents it being exported as a public symbol.

* Reduces overly-pedantic casting in the public headers (#644)

* Committing clang-format changes

* Fixes overly pedantic casting in public headers

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Use internal version of H5Eprint2 to avoid possible stack overflow (#661)

* Fixes for a couple of trivial warnings (#676)

* Committing clang-format changes

* Trivial warning fixes:

* Removes an unused done target in H5Tbit.c
* Add (void) to quiet "ignored return value" warnings in the generators
  (which generally ignore errors)

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Removes alternative function enter/leave macro scheme (#678)

* Committing clang-format changes

* Converted BEGIN_FUNC, etc. macros to FUNC_ENTER

* Rips out the BEGIN_FUNC, etc. macros

* Removes 'end if', etc. comments from H5HL package

* Committing clang-format changes

* Fixes an H5EA iterate issue

* Fixes an issue in the H5FA iterator code

* Further cleanup in bin/trace after macro removal

* Iterator changes in H5EA and H5FA

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Various CMake changes (#679)

* Committing clang-format changes

* Several CMake updates:

* Removes unused HDF5_ENABLE_HSIZET
* Switches TEST_SHELL_SCRIPTS to ON
* Sets SH_PROGRAM to bash instead of sh

* Set default build type back to RelWithDebInfo

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Revert "Removes alternative function enter/leave macro scheme (#678)"

This reverts commit edddb11b791adbdcaafed3ba718c95dd349a4e9a.

* err_compat test cleanup (#681)

* Committing clang-format changes

* Cleans up err_compat test and output

* Formatted source

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Sets the memory alloc sanity check option to disabled in autotools (#686)

* Revert "Sets the memory alloc sanity check option to disabled in autotools (#686)"

This reverts commit 652ffca58699388fff960c6a92c8ecfd1fc5d19b.

(Only for release branch).

* Removes alternative function enter/leave macro scheme (#678)

* Committing clang-format changes

* Converted BEGIN_FUNC, etc. macros to FUNC_ENTER

* Rips out the BEGIN_FUNC, etc. macros

* Removes 'end if', etc. comments from H5HL package

* Committing clang-format changes

* Fixes an H5EA iterate issue

* Fixes an issue in the H5FA iterator code

* Further cleanup in bin/trace after macro removal

* Iterator changes in H5EA and H5FA

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Committing clang-format changes

* Squashed commit of the following:

commit e2578640fedf671cf11535cf22313dd477da1165
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Fri Jul 16 10:57:51 2021 -0500

    Merge issue 839 changes to hdf5 1 10 (#841)

    * Revert addition of & to 2 parameters in DSetCreatPropList::setVirtual to
    maintain binary compatibility.

    * Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

    * Removes gratuitous (double)x.yF casts (#632)

    * Committing clang-format changes

    * Removes gratuitous (double)x.yF casts

    * Committing clang-format changes

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Cleans up a const warning left over from previous constification (#633)

    * Committing clang-format changes

    * Adds consts to a few global variables

    * Cleans up a const warning left over from previous constification

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Purges UFAIL from the library (#637)

    * Committing clang-format changes

    * Purges UFAIL from the library

    * H5HL_insert change requested in PR

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Bmr dev hdffv 11223 (#640)

    * Fixed HDFFV-11223 (CVE-2018-14460)

    Description
        - Added checks against buffer size to prevent segfault, in case of data
          corruption, for sdim->size and sdim->max.
        - Renamed data files in an existing test to shorten their length
          as agreed with other developers previously.
    Platforms tested:
        Linux/64 (jelly)

    * Committing clang-format changes

    * Updated for test files

    * Updated for HDFFV-11223

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Committing clang-format changes

    * Restore "error:" in line 2666.

    * Revert "Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)"

    This reverts commit 426b50484841118cf633fd6147302a63a30fd746.

    * Snapshot version 1.10 release 8-1. Update version to 1.10.8-2.

    Squashed commit of the following:

    commit 60734e63fe077238f10de3d6ca8f037f9a42af89
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Thu Jun 24 14:20:39 2021 -0500

        Hdf5 1 10 Fix tools test (#796)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        * Merge warnings files fixes from develop

        * Fix cmake configure path

        * Update missing release note info.

        * Update code owners

        * Add known problem

        * Use only core library for testing dynamic plugins.

        CMake uses H5_HAVE_DIRECT instead of DIRECT_VFD

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit bfb780a4441e4ef43dd23708d415e5e3b84800f4
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Wed Jun 23 14:11:46 2021 -0500

        Hdf5 1 10 Release Note (#786)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        * Merge warnings files fixes from develop

        * Fix cmake configure path

        * Update missing release note info.

        * Update code owners

        * Add known problem

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit 9f5040736868f8eec584ab5af6d2a77e4d45ae30
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Tue Jun 22 07:03:26 2021 -0500

        Hdf5 1 10 Update missing release note info. (#778)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        * Merge warnings files fixes from develop

        * Fix cmake configure path

        * Update missing release note info.

        * Update code owners

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit 2e80c9cdec98d6cee5b4609643839a4ad2a848fb
    Author: Dana Robinson <43805+derobins@users.noreply.github.com>
    Date:   Fri Jun 18 06:42:23 2021 -0700

        Brings hash table IDs feature from develop/1.12 (#768)

        * Brings updated tid test from develop

        * Adds empty H5Iint.c and H5Idbg.c files

        * H5I renaming to match 1.12/develop

        * Splits off H5I debug code to H5Idbg.c

        * Splits internal H5I.c functionality to H5Iint.c

        * Header cleanup

        * More renaming cleanup to match develop/1.12

        * Adds "save last ID" optimization

        * Adds uthash.h

        * Adds hash table IDs from develop/1.12

        * Committing clang-format changes

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit 1e29bcbfe24956f0158b3363a3fbb8a42c8e7e0f
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Thu Jun 17 11:21:43 2021 -0500

        Hdf5 1 10 Fix cmake configure path (#762)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        * Merge warnings files fixes from develop

        * Fix cmake configure path

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit 475cdaf431c9ef5bfef6243dbc26d0005d08c49d
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Wed Jun 16 15:45:58 2021 -0500

        Hdf5 1 10 merge warnings changes (#756)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        * Merge warnings files fixes from develop

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit e25980e7f35b8508db90648409ba80ee36d61c9e
    Author: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
    Date:   Tue Jun 8 14:37:13 2021 -0500

        Hdf5 1 10 merges of CMake changes (#738)

        * HDFFV-10865 - merge from dev, HDFArray perf fix.

        * Remove duplicate setting

        * Whitespace changes after clang format

        * Undo version 11 clang format changes

        * Merge CMake changes from develop

        * test testing script merge from develop

        * Update supported platforms

        * PR#3 merge from develop

        * Merge gcc 10 diagnostics option from develop

        * Merge #318 OSX changes from develop

        * Merge small changes from develop

        * Minor non-space formatting changes

        * #386 copyright corrections for java folder

        * Merges from develop

        #358 patches from vtk
        #361 fix header guard spelling

        * Merge updates

        #358 patches from vtk
        #361 fix header guard spelling

        * format fix

        * Fix missing underscore and make H5public.h closer to dev

        * Merges from develop

        #340 clang -Wformat-security warnings
        #360 Fixed uninitialized warnings
        header guard underscore cleanup
        JNI cleanup

        * format alignment

        * Add missing test ref file

        * Merge #380 from develop

        * Finish java merges from develop

        * Fix java issues with tests and javadoc

        * Correct use of attribute access plist

        * Remove debug code

        * Remove unused variable

        * Change file access to read only for java tests

        * Split clang format operations.

        * More javadoc comments

        * Remove pre-split setting

        * format source

        * Change windows TS to use older VS.

        * Mostly all javadoc fixes, one argument rename.

        * synch file

        * Merge of long double fix and compiler flags

        * HDFFV-11229 merge changes from develop

        * HDFFV-11229 correct test script

        * HDFFV-11229 update autotools test script for two ref files

        * HDFFV-11229 merge dev changes for long double display in tools

        * Committing clang-format changes

        * minor whitespace

        * remove unneeded macro

        * Committing clang-format changes

        * Add "option" command for clang options

        * Rework CMake add_custom to use the BYPRODUCTS argument

        Update pkgconfig scripts for parallel builds.
        Fix install COPYING file reference.
        Remove unused round defines.
        Change CMake default setting of BUILD_CPP to off.

        * Fortran target depends

        * Remove incorrect source attribute

        * Revert define removal

        * printf specifiers and VS2015 min changes

        * Committing clang-format changes

        * Add time struct

        * TRILAB-227 and tools debug merges from develop

        * Merge various changes from dev

        * Issue #669 remove version from pkgcfg filename

        * remove version from h5cc script

        * doxygen changes merged from develop

        * Committing clang-format changes

        * Merge CMake fortran ninja changes from dev

        * Enable fortran to gcc yaml

        * Refactor Fortran CMake config tests and CMake test args

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    commit 061b23ac0011d3a26f660a7f4d07c40f41d63f10
    Author: Larry Knox <lrknox@hdfgroup.org>
    Date:   Thu Jun 3 16:07:23 2021 -0500

        Partial merge issue #642 develop branch PRs to Hdf5 1 10 (#718)

        * Revert addition of & to 2 parameters in DSetCreatPropList::setVirtual to
        maintain binary compatibility.

        * Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

        * Removes gratuitous (double)x.yF casts (#632)

        * Committing clang-format changes

        * Removes gratuitous (double)x.yF casts

        * Committing clang-format changes

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

        * Cleans up a const warning left over from previous constification (#633)

        * Committing clang-format changes

        * Adds consts to a few global variables

        * Cleans up a const warning left over from previous constification

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

        * Purges UFAIL from the library (#637)

        * Committing clang-format changes

        * Purges UFAIL from the library

        * H5HL_insert change requested in PR

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

        * Bmr dev hdffv 11223 (#640)

        * Fixed HDFFV-11223 (CVE-2018-14460)

        Description
            - Added checks against buffer size to prevent segfault, in case of data
              corruption, for sdim->size and sdim->max.
            - Renamed data files in an existing test to shorten their length
              as agreed with other developers previously.
        Platforms tested:
            Linux/64 (jelly)

        * Committing clang-format changes

        * Updated for test files

        * Updated for HDFFV-11223

        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

        * Committing clang-format changes

        * Restore "error:" in line 2666.

        * Revert "Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)"

        This reverts commit 426b50484841118cf633fd6147302a63a30fd746.

        Co-authored-by: jhendersonHDF <jhenderson@hdfgroup.org>
        Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
        Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
        Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>

    * (fix) Segmentation fault when using a compound type. (#143)

    * (fix) Segmentation fault when using a compound type.

    In the case when a compounded attribute is written to dataset
    followed by writing the data with a data transform function
    to the dataset will result in a segmentation fault. It turns out
    the data is classified as compounded while it is not. Now, the
    state is always reset first to not compounded followed by the
    existing check if the variable is compounded.

    * (fix) Removed undesired comment lines.

    * (fix) Segmentation fault when using a compound type: added test.

    * (fix) Added the missing cmpd_transform.c file to MANIFEST.

    * (fix) cmpd_dtransform test: autotools and source header.

    Added the cmp_dtransform test to the autotools configuration and
    updated the HDF Group copyright header.

    Co-authored-by: Jan-Willem Blokland <Jan-Willem.Blokland@Shell.com>

    * (fix) H5Z_xform_create function and scientific notation (#144)

    * (fix) H5Z_xform_create function and scientific notation

    Implemented a more sophisticated check to support scientific notation
    in the expression of the H5Zset_data_transform function.

    * (fix) H5Z_xform_create and scientific notation: Added test.

    Added a test to demonstrate that the parsing of expression
    which includes scientific notation works correctly. Improved
    inline comment.

    Co-authored-by: Jan-Willem Blokland <Jan-Willem.Blokland@Shell.com>

    * Adds const to a few global variables (#623)

    * Committing clang-format changes

    * Adds consts to a few global variables

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Made private my_yyinput function static (#618)

    This prevents it being exported as a public symbol.

    * Reduces overly-pedantic casting in the public headers (#644)

    * Committing clang-format changes

    * Fixes overly pedantic casting in public headers

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Use internal version of H5Eprint2 to avoid possible stack overflow (#661)

    * Fixes for a couple of trivial warnings (#676)

    * Committing clang-format changes

    * Trivial warning fixes:

    * Removes an unused done target in H5Tbit.c
    * Add (void) to quiet "ignored return value" warnings in the generators
      (which generally ignore errors)

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Removes alternative function enter/leave macro scheme (#678)

    * Committing clang-format changes

    * Converted BEGIN_FUNC, etc. macros to FUNC_ENTER

    * Rips out the BEGIN_FUNC, etc. macros

    * Removes 'end if', etc. comments from H5HL package

    * Committing clang-format changes

    * Fixes an H5EA iterate issue

    * Fixes an issue in the H5FA iterator code

    * Further cleanup in bin/trace after macro removal

    * Iterator changes in H5EA and H5FA

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Various CMake changes (#679)

    * Committing clang-format changes

    * Several CMake updates:

    * Removes unused HDF5_ENABLE_HSIZET
    * Switches TEST_SHELL_SCRIPTS to ON
    * Sets SH_PROGRAM to bash instead of sh

    * Set default build type back to RelWithDebInfo

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Revert "Removes alternative function enter/leave macro scheme (#678)"

    This reverts commit edddb11b791adbdcaafed3ba718c95dd349a4e9a.

    * err_compat test cleanup (#681)

    * Committing clang-format changes

    * Cleans up err_compat test and output

    * Formatted source

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Sets the memory alloc sanity check option to disabled in autotools (#686)

    * Revert "Sets the memory alloc sanity check option to disabled in autotools (#686)"

    This reverts commit 652ffca58699388fff960c6a92c8ecfd1fc5d19b.

    (Only for release branch).

    * Removes alternative function enter/leave macro scheme (#678)

    * Committing clang-format changes

    * Converted BEGIN_FUNC, etc. macros to FUNC_ENTER

    * Rips out the BEGIN_FUNC, etc. macros

    * Removes 'end if', etc. comments from H5HL package

    * Committing clang-format changes

    * Fixes an H5EA iterate issue

    * Fixes an issue in the H5FA iterator code

    * Further cleanup in bin/trace after macro removal

    * Iterator changes in H5EA and H5FA

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Committing clang-format changes

    Co-authored-by: jhendersonHDF <jhenderson@hdfgroup.org>
    Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
    Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
    Co-authored-by: Jan-Willem Blokland <J.W.S.Blokland@XS4All.nl>
    Co-authored-by: Jan-Willem Blokland <Jan-Willem.Blokland@Shell.com>
    Co-authored-by: Sean McBride <sean@rogue-research.com>

commit 14794490ec522fbd3ac2faa6efa0920979490fbc
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Wed Jul 14 13:50:26 2021 -0500

    Update version to 1.10.8-2 after snapshot release of 1.10.8-1 (#838)

    * Revert addition of & to 2 parameters in DSetCreatPropList::setVirtual to
    maintain binary compatibility.

    * Fix H5Eget_auto2/H5Eauto_is_v2 to not clear error stack (#625)

    * Removes gratuitous (double)x.yF casts (#632)

    * Committing clang-format changes

    * Removes gratuitous (double)x.yF casts

    * Committing clang-format changes

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Cleans up a const warning left over from previous constification (#633)

    * Committing clang-format changes

    * Adds consts to a few global variables

    * Cleans up a const warning left over from previous constification

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Purges UFAIL from the library (#637)

    * Committing clang-format changes

    * Purges UFAIL from the library

    * H5HL_insert change requested in PR

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Bmr dev hdffv 11223 (#640)

    * Fixed HDFFV-11223 (CVE-2018-14460)

    Description
        - Added checks against buffer size to prevent segfault, in case of data
          corruption, for sdim->size and sdim->max.
        - Renamed data files in an existing test to shorten their length
          as agreed with other developers previously.
    Platforms tested:
        Linux/64 (jelly)

    * Committing clang-format changes

    * Updated for test files

    * Updated for HDFFV-11223

    Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

    * Committing clang-format changes

    * Restore "…
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@derobins @github-actions @bmribler @jwsblokland @seanm @brtnfld @byrnHDF
10 people authored Jul 26, 2021
1 parent 1aa2c34 commit 8590e58
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31 changes: 16 additions & 15 deletions c++/test/tarray.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -178,9 +178,9 @@ test_array_compound_array()
// Check the array dimensions
for (ii = 0; ii < ndims; ii++)
if (rdims1[ii] != tdims1[ii]) {
TestErrPrintf(
"Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii,
rdims1[ii], ii, tdims1[ii]);
TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%" PRIuHSIZE
", tdims1[%d]=%" PRIuHSIZE "\n",
ii, rdims1[ii], ii, tdims1[ii]);
continue;
} // end if

Expand All @@ -197,9 +197,9 @@ test_array_compound_array()
// Check the array dimensions
for (ii = 0; ii < ndims; ii++)
if (rdims1[ii] != tdims1[ii]) {
TestErrPrintf(
"Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii,
rdims1[ii], ii, tdims1[ii]);
TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%" PRIuHSIZE
", tdims1[%d]=%" PRIuHSIZE "\n",
ii, rdims1[ii], ii, tdims1[ii]);
continue;
} // end if

Expand Down Expand Up @@ -248,9 +248,9 @@ test_array_compound_array()
// Check the array dimensions
for (ii = 0; ii < ndims; ii++)
if (rdims1[ii] != tdims1[ii]) {
TestErrPrintf(
"Array dimension information doesn't match!, rdims1[%d]=%lld, tdims1[%d]=%lld\n", ii,
rdims1[ii], ii, tdims1[ii]);
TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%" PRIuHSIZE
", tdims1[%d]=%" PRIuHSIZE "\n",
ii, rdims1[ii], ii, tdims1[ii]);
continue;
} // end if

Expand All @@ -265,8 +265,9 @@ test_array_compound_array()
for (idxi = 0; idxi < SPACE1_DIM1; idxi++) {
for (idxj = 0; idxj < ARRAY1_DIM1; idxj++) {
if (wdata[idxi][idxj].i != rdata[idxi][idxj].i) {
TestErrPrintf("Array data information doesn't match!, wdata[%lld][%lld].i=%d, "
"rdata[%lld][%lld].i=%d\n",
TestErrPrintf("Array data information doesn't match!, wdata[%" PRIuHSIZE "][%" PRIuHSIZE
"].i=%d, "
"rdata[%" PRIuHSIZE "][%" PRIuHSIZE "].i=%d\n",
idxi, idxj, wdata[idxi][idxj].i, idxi, idxj, rdata[idxi][idxj].i);
continue;
} // end if
Expand Down Expand Up @@ -457,11 +458,11 @@ test_array_info()
// Check the array dimensions
for (ii = 0; ii < ndims; ii++)
if (rdims1[ii] != tdims1[ii]) {
TestErrPrintf(
"Array dimension information doesn't match!, rdims1[%d]=%llu, tdims1[%d]=z%llu\n", ii,
rdims1[ii], ii, tdims1[ii]);
TestErrPrintf("Array dimension information doesn't match!, rdims1[%d]=%" PRIuHSIZE
", tdims1[%d]=%" PRIuHSIZE "\n",
ii, rdims1[ii], ii, tdims1[ii]);
continue;
} // end if
}
}

// Close all
Expand Down
60 changes: 36 additions & 24 deletions c++/test/tattr.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -169,7 +169,8 @@ test_attr_basic_write()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data1[%" PRIuHSIZE
"]=%d,read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1[i], i, read_data1[i]);

// Create two more attributes for this dataset, but only write to one.
Expand All @@ -185,7 +186,8 @@ test_attr_basic_write()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1a[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1a[%llu]=%d,read_data1[%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data1a[%" PRIuHSIZE
"]=%d,read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1a[i], i, read_data1[i]);

// Close both attributes
Expand Down Expand Up @@ -448,7 +450,8 @@ test_attr_rename()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu%d\n",
TestErrPrintf("%d: attribute data different: attr_data1[%" PRIuHSIZE
"]=%d,read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1[i], i, read_data1[i]);

// Close attribute
Expand All @@ -472,7 +475,8 @@ test_attr_rename()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1a[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1a[%llu]=%d,read_data1[%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data1a[%" PRIuHSIZE
"]=%d,read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1a[i], i, read_data1[i]);

// Close attribute
Expand Down Expand Up @@ -537,7 +541,8 @@ test_attr_basic_read()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d, read_data1[%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data1[%" PRIuHSIZE
"]=%d, read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1[i], i, read_data1[i]);

/*
Expand Down Expand Up @@ -568,8 +573,9 @@ test_attr_basic_read()
for (i = 0; i < ATTR2_DIM1; i++)
for (j = 0; j < ATTR2_DIM2; j++)
if (attr_data2[i][j] != read_data2[i][j]) {
TestErrPrintf("%d: attribute data different: attr_data2[%llu][%llu]=%d, "
"read_data2[%llu][%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data2[%" PRIuHSIZE "][%" PRIuHSIZE
"]=%d, "
"read_data2[%" PRIuHSIZE "][%" PRIuHSIZE "]=%d\n",
__LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]);
}
PASSED();
Expand Down Expand Up @@ -772,14 +778,17 @@ test_attr_compound_read()
for (ii = 0; ii < ATTR4_DIM1; ii++)
for (jj = 0; jj < ATTR4_DIM2; jj++)
if (HDmemcmp(&attr_data4[ii][jj], &read_data4[ii][jj], sizeof(struct attr4_struct)) != 0) {
TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].i=%d, "
"read_data4[%llu][%llu].i=%d\n",
TestErrPrintf("%d:attribute data different: attr_data4[%" PRIuHSIZE "][%" PRIuHSIZE
"].i=%d, "
"read_data4[%" PRIuHSIZE "][%" PRIuHSIZE "].i=%d\n",
__LINE__, ii, jj, attr_data4[ii][jj].i, ii, jj, read_data4[ii][jj].i);
TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].d=%f, "
"read_data4[%llu][%llu].d=%f\n",
TestErrPrintf("%d:attribute data different: attr_data4[%" PRIuHSIZE "][%" PRIuHSIZE
"].d=%f, "
"read_data4[%" PRIuHSIZE "][%" PRIuHSIZE "].d=%f\n",
__LINE__, ii, jj, attr_data4[ii][jj].d, ii, jj, read_data4[ii][jj].d);
TestErrPrintf("%d:attribute data different: attr_data4[%llu][%llu].c=%c, "
"read_data4[%llu][%llu].c=%c\n",
TestErrPrintf("%d:attribute data different: attr_data4[%" PRIuHSIZE "][%" PRIuHSIZE
"].c=%c, "
"read_data4[%" PRIuHSIZE "][%" PRIuHSIZE "].c=%c\n",
__LINE__, ii, jj, attr_data4[ii][jj].c, ii, jj, read_data4[ii][jj].c);
} /* end if */

Expand Down Expand Up @@ -1042,10 +1051,10 @@ test_attr_mult_read()

// Get the dims of the dataspace and verify them
hsize_t dims[ATTR_MAX_DIMS]; // Attribute dimensions
int ndims = space.getSimpleExtentDims(dims);
if ((long)dims[0] != (long)ATTR1_DIM1)
TestErrPrintf("%d:attribute dimensions different: dims[0]=%d, should be %llu\n", __LINE__,
(int)dims[0], ATTR1_DIM1);
(void)space.getSimpleExtentDims(dims);
if (dims[0] != ATTR1_DIM1)
TestErrPrintf("%d:attribute dimensions different: dims[0]=%d, should be %" PRIuHSIZE "\n",
__LINE__, static_cast<int>(dims[0]), ATTR1_DIM1);

/* Verify Datatype */

Expand All @@ -1072,7 +1081,8 @@ test_attr_mult_read()
// Verify values read in
for (i = 0; i < ATTR1_DIM1; i++)
if (attr_data1[i] != read_data1[i])
TestErrPrintf("%d: attribute data different: attr_data1[%llu]=%d,read_data1[%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data1[%" PRIuHSIZE
"]=%d,read_data1[%" PRIuHSIZE "]=%d\n",
__LINE__, i, attr_data1[i], i, read_data1[i]);

// Verify Name
Expand All @@ -1095,7 +1105,7 @@ test_attr_mult_read()
verify_val(rank, ATTR2_RANK, "DataSpace::getSimpleExtentNdims", __LINE__, __FILE__);

// Get the dims of the dataspace and verify them
ndims = space.getSimpleExtentDims(dims);
int ndims = space.getSimpleExtentDims(dims);

verify_val((long)dims[0], (long)ATTR2_DIM1, "DataSpace::getSimpleExtentDims", __LINE__, __FILE__);
verify_val((long)dims[1], (long)ATTR2_DIM2, "DataSpace::getSimpleExtentDims", __LINE__, __FILE__);
Expand Down Expand Up @@ -1127,8 +1137,9 @@ test_attr_mult_read()
for (i = 0; i < ATTR2_DIM1; i++)
for (j = 0; j < ATTR2_DIM2; j++)
if (attr_data2[i][j] != read_data2[i][j])
TestErrPrintf("%d: attribute data different: attr_data2[%llu][%llu]=%d, "
"read_data2[%llu][%llu]=%d\n",
TestErrPrintf("%d: attribute data different: attr_data2[%" PRIuHSIZE "][%" PRIuHSIZE
"]=%d, "
"read_data2[%" PRIuHSIZE "][%" PRIuHSIZE "]=%d\n",
__LINE__, i, j, attr_data2[i][j], i, j, read_data2[i][j]);

// Verify Name
Expand Down Expand Up @@ -1181,9 +1192,10 @@ test_attr_mult_read()
for (i = 0; i < ATTR3_DIM1; i++)
for (j = 0; j < ATTR3_DIM2; j++)
for (k = 0; k < ATTR3_DIM3; k++)
if (attr_data3[i][j][k] != read_data3[i][j][k])
TestErrPrintf("%d: attribute data different: attr_data3[%llu][%llu][%llu]=%f, "
"read_data3[%llu][%llu][%llu]=%f\n",
if (abs(attr_data3[i][j][k] - read_data3[i][j][k]) > DBL_EPSILON)
TestErrPrintf("%d: attribute data different: attr_data3[%" PRIuHSIZE "][%" PRIuHSIZE
"][%" PRIuHSIZE "]=%f, "
"read_data3[%" PRIuHSIZE "][%" PRIuHSIZE "][%" PRIuHSIZE "]=%f\n",
__LINE__, i, j, k, attr_data3[i][j][k], i, j, k, read_data3[i][j][k]);

// Verify Name
Expand Down
7 changes: 5 additions & 2 deletions c++/test/ttypes.cpp
View file
Original file line number Diff line number Diff line change
Expand Up @@ -726,8 +726,11 @@ test_named()

// It should be possible to define an attribute for the named type
Attribute attr1 = itype.createAttribute("attr1", PredType::NATIVE_UCHAR, space);
for (i = 0; i < ds_size[0] * ds_size[1]; i++)
attr_data[0][i] = (int)i; /*tricky*/
for (hsize_t i = 0; i < ds_size[0]; i++) {
for (hsize_t j = 0; j < ds_size[1]; j++) {
attr_data[i][j] = static_cast<unsigned>(i * ds_size[1] + j);
}
}
attr1.write(PredType::NATIVE_UINT, attr_data);
attr1.close();

Expand Down
41 changes: 9 additions & 32 deletions config/cmake/H5pubconf.h.in
View file
Original file line number Diff line number Diff line change
Expand Up @@ -35,6 +35,10 @@
/* Define if dev_t is a scalar */
#cmakedefine H5_DEV_T_IS_SCALAR @H5_DEV_T_IS_SCALAR@

/* Define if your system is IBM ppc64le and cannot convert some long double
values correctly. */
#cmakedefine H5_DISABLE_SOME_LDOUBLE_CONV @H5_DISABLE_SOME_LDOUBLE_CONV@

/* Define to dummy `main' function (if any) required to link to the Fortran
libraries. */
#cmakedefine H5_FC_DUMMY_MAIN @H5_FC_DUMMY_MAIN@
Expand Down Expand Up @@ -111,7 +115,7 @@
#cmakedefine H5_HAVE_CODESTACK @H5_HAVE_CODESTACK@

/* Define to 1 if you have the <curl/curl.h> header file. */
#cmakedefine H5_HAVE_CURL_H @H5_HAVE_CURL_H@
#cmakedefine H5_HAVE_CURL_CURL_H @H5_HAVE_CURL_H@

/* Define if Darwin or Mac OS X */
#cmakedefine H5_HAVE_DARWIN @H5_HAVE_DARWIN@
Expand Down Expand Up @@ -191,9 +195,6 @@
/* Define to 1 if you have the <hdfs.h> header file. */
#cmakedefine H5_HAVE_HDFS_H @H5_HAVE_HDFS_H@

/* Define if the compiler understands inline */
#cmakedefine H5_HAVE_INLINE @H5_HAVE_INLINE@

/* Define if parallel library will contain instrumentation to detect correct
optimization operation */
#cmakedefine H5_HAVE_INSTRUMENTED_LIBRARY @H5_HAVE_INSTRUMENTED_LIBRARY@
Expand Down Expand Up @@ -340,16 +341,13 @@
/* Define to 1 if you have the `sigsetjmp' function. */
#cmakedefine H5_HAVE_SIGSETJMP @H5_HAVE_SIGSETJMP@

/* Define to 1 if you have the `snprintf' function. */
#cmakedefine H5_HAVE_SNPRINTF @H5_HAVE_SNPRINTF@

/* Define to 1 if you have the `srandom' function. */
#cmakedefine H5_HAVE_SRANDOM @H5_HAVE_SRANDOM@

/* Define to 1 if you have the `stat64' function. */
#cmakedefine H5_HAVE_STAT64 @H5_HAVE_STAT64@

/* Define if `struct stat' has the `st_blocks' field */
/* Define if struct stat has the st_blocks field */
#cmakedefine H5_HAVE_STAT_ST_BLOCKS @H5_HAVE_STAT_ST_BLOCKS@

/* Define to 1 if you have the <stddef.h> header file. */
Expand All @@ -367,12 +365,6 @@
/* Define to 1 if you have the <string.h> header file. */
#cmakedefine H5_HAVE_STRING_H @H5_HAVE_STRING_H@

/* Define to 1 if you have the `strtoll' function. */
#cmakedefine H5_HAVE_STRTOLL @H5_HAVE_STRTOLL@

/* Define to 1 if you have the `strtoull' function. */
#cmakedefine H5_HAVE_STRTOULL @H5_HAVE_STRTOULL@

/* Define if struct text_info is defined */
#cmakedefine H5_HAVE_STRUCT_TEXT_INFO @H5_HAVE_STRUCT_TEXT_INFO@

Expand All @@ -382,9 +374,6 @@
/* Define to 1 if you have the `symlink' function. */
#cmakedefine H5_HAVE_SYMLINK @H5_HAVE_SYMLINK@

/* Define to 1 if you have the `system' function. */
#cmakedefine H5_HAVE_SYSTEM @H5_HAVE_SYSTEM@

/* Define to 1 if you have the <sys/file.h> header file. */
#cmakedefine H5_HAVE_SYS_FILE_H @H5_HAVE_SYS_FILE_H@

Expand Down Expand Up @@ -438,9 +427,6 @@
/* Define to 1 if you have the `vasprintf' function. */
#cmakedefine H5_HAVE_VASPRINTF @H5_HAVE_VASPRINTF@

/* Define to 1 if you have the `vsnprintf' function. */
#cmakedefine H5_HAVE_VSNPRINTF @H5_HAVE_VSNPRINTF@

/* Define to 1 if you have the `waitpid' function. */
#cmakedefine H5_HAVE_WAITPID @H5_HAVE_WAITPID@

Expand All @@ -462,12 +448,6 @@
/* Define to 1 if you have the `_scrsize' function. */
#cmakedefine H5_HAVE__SCRSIZE @H5_HAVE__SCRSIZE@

/* Define if the compiler understands __inline */
#cmakedefine H5_HAVE___INLINE @H5_HAVE___INLINE@

/* Define if the compiler understands __inline__ */
#cmakedefine H5_HAVE___INLINE__ @H5_HAVE___INLINE__@

/* Define if the library will ignore file locks when disabled */
#cmakedefine H5_IGNORE_DISABLED_FILE_LOCKS @H5_IGNORE_DISABLED_FILE_LOCKS@

Expand All @@ -490,9 +470,6 @@
with special algorithm. */
#cmakedefine H5_LONG_TO_LDOUBLE_SPECIAL @H5_LONG_TO_LDOUBLE_SPECIAL@

/* Define if your system is power6 and cannot convert some long double values. */
#cmakedefine H5_DISABLE_SOME_LDOUBLE_CONV @H5_DISABLE_SOME_LDOUBLE_CONV@

/* Define to the sub-directory where libtool stores uninstalled libraries. */
#cmakedefine H5_LT_OBJDIR @H5_LT_OBJDIR@

Expand Down Expand Up @@ -708,15 +685,15 @@
/* Define to 1 if you can safely include both <sys/time.h> and <time.h>. */
#cmakedefine H5_TIME_WITH_SYS_TIME @H5_TIME_WITH_SYS_TIME@

/* Define using v1.10 public API symbols by default */
#cmakedefine H5_USE_110_API_DEFAULT @H5_USE_110_API_DEFAULT@

/* Define using v1.6 public API symbols by default */
#cmakedefine H5_USE_16_API_DEFAULT @H5_USE_16_API_DEFAULT@

/* Define using v1.8 public API symbols by default */
#cmakedefine H5_USE_18_API_DEFAULT @H5_USE_18_API_DEFAULT@

/* Define using v1.10 public API symbols by default */
#cmakedefine H5_USE_110_API_DEFAULT @H5_USE_110_API_DEFAULT@

/* Define if the library will use file locking */
#cmakedefine H5_USE_FILE_LOCKING @H5_USE_FILE_LOCKING@

Expand Down
20 changes: 0 additions & 20 deletions config/cmake_ext_mod/ConfigureChecks.cmake
View file
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,6 @@ if (WINDOWS)
set (${HDF_PREFIX}_HAVE_WIN32_API 1)
set (${HDF_PREFIX}_HAVE_LIBM 1)
set (${HDF_PREFIX}_HAVE_STRDUP 1)
set (${HDF_PREFIX}_HAVE_SYSTEM 1)
set (${HDF_PREFIX}_HAVE_LONGJMP 1)
if (NOT MINGW)
set (${HDF_PREFIX}_HAVE_GETHOSTNAME 1)
Expand Down Expand Up @@ -499,26 +498,15 @@ CHECK_FUNCTION_EXISTS (siglongjmp ${HDF_PREFIX}_HAVE_SIGLONGJMP)
CHECK_FUNCTION_EXISTS (sigsetjmp ${HDF_PREFIX}_HAVE_SIGSETJMP)
CHECK_FUNCTION_EXISTS (sigprocmask ${HDF_PREFIX}_HAVE_SIGPROCMASK)

CHECK_FUNCTION_EXISTS (snprintf ${HDF_PREFIX}_HAVE_SNPRINTF)
CHECK_FUNCTION_EXISTS (srandom ${HDF_PREFIX}_HAVE_SRANDOM)
CHECK_FUNCTION_EXISTS (strdup ${HDF_PREFIX}_HAVE_STRDUP)
CHECK_FUNCTION_EXISTS (strtoll ${HDF_PREFIX}_HAVE_STRTOLL)
CHECK_FUNCTION_EXISTS (strtoull ${HDF_PREFIX}_HAVE_STRTOULL)
CHECK_FUNCTION_EXISTS (symlink ${HDF_PREFIX}_HAVE_SYMLINK)
CHECK_FUNCTION_EXISTS (system ${HDF_PREFIX}_HAVE_SYSTEM)

CHECK_FUNCTION_EXISTS (tmpfile ${HDF_PREFIX}_HAVE_TMPFILE)
CHECK_FUNCTION_EXISTS (asprintf ${HDF_PREFIX}_HAVE_ASPRINTF)
CHECK_FUNCTION_EXISTS (vasprintf ${HDF_PREFIX}_HAVE_VASPRINTF)
CHECK_FUNCTION_EXISTS (waitpid ${HDF_PREFIX}_HAVE_WAITPID)

CHECK_FUNCTION_EXISTS (vsnprintf ${HDF_PREFIX}_HAVE_VSNPRINTF)
if (MINGW OR NOT WINDOWS)
if (${HDF_PREFIX}_HAVE_VSNPRINTF)
HDF_FUNCTION_TEST (VSNPRINTF_WORKS)
endif ()
endif ()

#-----------------------------------------------------------------------------
# sigsetjmp is special; may actually be a macro
#-----------------------------------------------------------------------------
Expand Down Expand Up @@ -609,14 +597,6 @@ if (WINDOWS)
endif ()
endif ()

#-----------------------------------------------------------------------------
# Determine how 'inline' is used
#-----------------------------------------------------------------------------
foreach (inline_test inline __inline__ __inline)
string (TOUPPER ${inline_test} INLINE_TEST_MACRO)
HDF_FUNCTION_TEST (HAVE_${INLINE_TEST_MACRO})
endforeach ()

#-----------------------------------------------------------------------------
# Check how to print a Long Long integer
#-----------------------------------------------------------------------------
Expand Down
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