Skip to content
@Hekstra-Lab

Hekstra Lab

GitHub of the Hekstra Lab. Note: Careless and Reciprocal Spaceship have migrated to https://github.com/rs-station

Popular repositories Loading

  1. phase-retrieval phase-retrieval Public

    A small library implementing phase retrieval algorithms for 2D images.

    Jupyter Notebook 24 10

  2. colav colav Public

    Calculate protein structural representations (dihedral angles, CA pairwise distances, and strain analysis) for downstream analysis (e.g., PCA, t-SNE, or UMAP).

    Jupyter Notebook 7 1

  3. mdtools mdtools Public

    Tools for running MD simulations in OpenMM

    Python 6 2

  4. scientific-python-bootcamp scientific-python-bootcamp Public

    Notebooks from a three day introduction to scientific computing in python at Harvard University.

    Jupyter Notebook 3 2

  5. SFcalculator SFcalculator Public

    3 1

  6. microutil microutil Public

    Python utils for working microscopy datasets

    Python 2 2

Repositories

Showing 10 of 44 repositories
  • SFcalculator_torch Public

    Differentiable pipeline connecting protein atomic models and crystallography structure factors

    Hekstra-Lab/SFcalculator_torch’s past year of commit activity
    Python 2 MIT 2 1 0 Updated Dec 15, 2024
  • raman-analysis Public

    Spontaneous Raman analysis library

    Hekstra-Lab/raman-analysis’s past year of commit activity
    Python 1 1 1 4 Updated Dec 3, 2024
  • dw-examples Public

    Examples of merging crystallographic intensities with a bivariate prior

    Hekstra-Lab/dw-examples’s past year of commit activity
    Jupyter Notebook 0 0 1 0 Updated Nov 19, 2024
  • integrator Public

    Proof of concept profile fitting and integration with neural nets

    Hekstra-Lab/integrator’s past year of commit activity
    Python 2 0 0 0 Updated Oct 22, 2024
  • colav Public

    Calculate protein structural representations (dihedral angles, CA pairwise distances, and strain analysis) for downstream analysis (e.g., PCA, t-SNE, or UMAP).

    Hekstra-Lab/colav’s past year of commit activity
    Jupyter Notebook 7 MIT 1 0 0 Updated Sep 11, 2024
  • dw Public

    jupyter notebooks exploring the double-Wilson model

    Hekstra-Lab/dw’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Jul 26, 2024
  • room-of-requirement Public

    Useful Lab Utilities

    Hekstra-Lab/room-of-requirement’s past year of commit activity
    Jupyter Notebook 0 1 1 0 Updated Jul 25, 2024
  • yeast-mrcnn Public

    Another implementation of mask-rcnn for detecting budding yeast cells in microscopy images

    Hekstra-Lab/yeast-mrcnn’s past year of commit activity
    Python 0 MIT 0 3 1 Updated Jul 2, 2024
  • microutil Public

    Python utils for working microscopy datasets

    Hekstra-Lab/microutil’s past year of commit activity
    Python 2 BSD-3-Clause 2 7 1 Updated Jul 2, 2024
  • fast-overlap Public

    meep meep

    Hekstra-Lab/fast-overlap’s past year of commit activity
    Python 0 2 2 1 Updated Jul 2, 2024

Top languages

Loading…

Most used topics

Loading…