Question: How to create ExtractableDataSet in a YamlRepository using the CLI

[rkm]

I'm trying to bootstrap the SMI extraction pipeline using only a YamlRepository and a set of existing tables. So far, I've setup the logging server, imported all the TableInfos (including Catalogue creation), created JoinInfos between the Study/Series/Image tables for each modality, and set IsPrimaryExtractionTable.

When running the SMI CohortExtractor, no Catalogues are found. This is because it starts by looking for ExtractableDataSets. Looking at an export of a previous platform database, these appear to have a very simple format:

Catalogue_ID: 1
DisableExtraction: false
Project_ID: 
ID: 1

I can create these manually, but is there any way to make them using the rdmp-cli?

[JFriel]

I don't believe there is currently a nice way to create them via the CLI. Will add a ticket and something like "rdmp.exe CreateExtractableDataset ..." should be available in the next release

[tznind]

Should be a command called like 'make catalog extractable' from memory https://github.com/HicServices/RDMP/blob/develop/Rdmp.Core%2FCommandExecution%2FAtomicCommands%2FExecuteCommandChangeExtractability.cs

…

On Thu, 25 Jul 2024, 09:51 James Friel, ***@***.***> wrote: I don't believe there is currently a nice way to create them via the CLI. Will add a ticket and something like "rdmp.exe CreateExtractableDataset ..." should be available in the next release — Reply to this email directly, view it on GitHub <#1903 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AHO3C5G54QHDMHJZYKPY25DZOC37NAVCNFSM6AAAAABLOCBH32VHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTAMJUGY3DANI> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[rkm]

That worked - thanks Thomas!