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@IBT-FMI

FOS Functional and Molecular Imaging @MIT+ETH+UZH

Free and Open Source Software focused on functional and molecular imaging.

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  1. SAMRI SAMRI Public

    Small Animal Magnetic Resonance Imaging via Python.

    Python 42 27

  2. mouse-brain-templates mouse-brain-templates Public

    Generate a package-manager-friendly mouse brain atlases collection.

    Shell 20 7

  3. gebuilder gebuilder Public

    Gentoo System and Image Builder

    Shell 11

  4. StereotaXYZ StereotaXYZ Public

    Toolkit for the Empirical Design of Stereotactic Brain Implants

    Python 8 1

  5. calciumfMRI calciumfMRI Public

    Collection of LabView & Matlab tools for simultaneous calcium & fMRI measurements

    MATLAB 3 1

  6. COSplay COSplay Public

    Contrast Optimized Stimulation player

    Python 2 3

Repositories

Showing 10 of 12 repositories
  • ABI-expression-data_generator Public

    Generate a package-manager-friendly archive of ABI gene expression maps registered in SAMRI standard space.

    IBT-FMI/ABI-expression-data_generator’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Oct 30, 2024
  • ABI-connectivity-data_generator Public

    Generate a package-manager-friendly archive of ABI connectivity maps registered in SAMRI standard space.

    IBT-FMI/ABI-connectivity-data_generator’s past year of commit activity
    Python 1 MIT 0 1 0 Updated Oct 30, 2024
  • SAMRI Public

    Small Animal Magnetic Resonance Imaging via Python.

    IBT-FMI/SAMRI’s past year of commit activity
    Python 42 GPL-3.0 27 20 (1 issue needs help) 0 Updated Mar 4, 2024
  • mouse-brain-templates Public

    Generate a package-manager-friendly mouse brain atlases collection.

    IBT-FMI/mouse-brain-templates’s past year of commit activity
    Shell 20 MIT 7 2 0 Updated Aug 4, 2023
  • COSplay Public

    Contrast Optimized Stimulation player

    IBT-FMI/COSplay’s past year of commit activity
    Python 2 GPL-3.0 3 9 1 Updated Jun 1, 2023
  • gebuilder Public

    Gentoo System and Image Builder

    IBT-FMI/gebuilder’s past year of commit activity
    Shell 11 GPL-3.0 0 12 0 Updated May 10, 2023
  • mockup_mouse-brain-templates Public

    Fully integrated provenance-aware resource for the Mouse Brain Templates package

    IBT-FMI/mockup_mouse-brain-templates’s past year of commit activity
    0 0 1 0 Updated Apr 26, 2023
  • StereotaXYZ Public

    Toolkit for the Empirical Design of Stereotactic Brain Implants

    IBT-FMI/StereotaXYZ’s past year of commit activity
    Python 8 LGPL-3.0 1 0 0 Updated May 15, 2020
  • NeuroGentooProject Public
    IBT-FMI/NeuroGentooProject’s past year of commit activity
    Shell 1 0 2 0 Updated Aug 17, 2018
  • calciumfMRI Public

    Collection of LabView & Matlab tools for simultaneous calcium & fMRI measurements

    IBT-FMI/calciumfMRI’s past year of commit activity
    MATLAB 3 Unlicense 1 0 0 Updated Jul 24, 2018
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