Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Minor Bug Fixes and Improvements - Manual Testing Notes #50

Closed
ubyndr opened this issue Sep 20, 2023 · 0 comments · Fixed by #51
Closed

Minor Bug Fixes and Improvements - Manual Testing Notes #50

ubyndr opened this issue Sep 20, 2023 · 0 comments · Fixed by #51
Assignees
@ubyndr

Comments

@ubyndr
Copy link
Collaborator

ubyndr commented Sep 20, 2023

Issues/bugs:

  • edge labels were displaying IDs instead of labels. Text wrapping should also be applied on edge labels
  • cell set and CL terms should have different colours.
  • some nodes were missing types, generate_subgraph in graph_generator_utils.py need some updates
  • AnndataEnrichmentAnalyzer initialiser's has an issue related with type hints.
  • from_file_path in AnndataEnricher has missing parameter

Questions:
@ubyndr ubyndr self-assigned this Sep 20, 2023
ubyndr added a commit that referenced this issue Sep 20, 2023
@ubyndr
Bug fixes mentioned in #50
acdebdb
@ubyndr ubyndr mentioned this issue Sep 20, 2023
Merged
ubyndr pushed a commit that referenced this issue Sep 29, 2023
Minor bug fixes and improvements manual testing notes (#51)
b4a5551 
* Format changes

* Added pygraphviz

* Refactored context_list usage and added get_context_list method

* Version has been updated to 0.1.3

* Added select_node_with_property method

* Refactored subgraph generation for visualize_rdf_graph method.

* Bug fixes mentioned in #50
ubyndr pushed a commit that referenced this issue Sep 29, 2023
Test case implementation (#52)
fb541f8 
* Format changes

* Added pygraphviz

* Refactored context_list usage and added get_context_list method

* Version has been updated to 0.1.3

* Added select_node_with_property method

* Refactored subgraph generation for visualize_rdf_graph method.

* Bug fixes mentioned in #50

* Added test cases, fixed minor bugs

* Added a script to modify h5ad files
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@ubyndr ubyndr

Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Minor bug fixes and improvements manual testing notes INCATools/pandasaurus_cxg
1 participant
@ubyndr