Functional connectivity #61

didi-hou · 2024-03-13T13:10:56Z

This PR added necessary scripts and documentation for visualizing functional connectivity.

Added script for computing functional connectivity
Added script for computing louvain communities
Added script for computing synaptic input
Added script for plotting functional connectivity of simulated model and FC of experimental data
Added section 3.5 in the notebook

didi-hou added 12 commits March 1, 2024 15:12

add a new section 2.5 for visualize functional connectivity

e5d14f3

create script to compute synaptic input

e4596f9

create script to determine communities in the functional connectivity

7d2bfa5

create script to compute functional connectivity

a2e6a38

create script to visualize functional connectivity

978a44e

add section in notebook to visualize functional conenctivity

6a13464

adjust the functional connectivity plot

b891331

corrected typos

b31f9fa

fix the display of functional connectivity plot

4e0cf38

removed outputs

d98b4c2

enhance the functional connectivity plot

69a9ea6

restored the change of plot interareal connectivity

2a2afd6

didi-hou added the enhancement New feature or request label Mar 13, 2024

didi-hou requested a review from shimoura March 13, 2024 13:10

didi-hou assigned shimoura and didi-hou Mar 13, 2024

shimoura approved these changes Mar 13, 2024

View reviewed changes

shimoura merged commit 681447b into INM-6:master Mar 13, 2024

didi-hou deleted the functional_connectivity branch March 13, 2024 14:32

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