This repository contains the scripts used for generating the results in the leopard paper: High genetic diversity and low differentiation reflect the ecological versatility of the African leopard. DOI: https://doi.org/10.1016/j.cub.2021.01.064
This repository is not intended to be a fully automized pipeline for reproducing all the results but it does contain all scripts required to produce the results shown in the paper.
All scripts used to generate the main results
All scripts used for mapping and quality filtering of the reference genomes.
Scripts for plotting the main figures