🎨🐍 Update deprecated pandas method invocation #279
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Update bedtools column summation to prevent message: /home/evan/miniconda3/envs/autometa/lib/python3.9/site-packages/autometa/common/external/bedtools.py:107: FutureWarning: Indexing with multiple keys (implicitly converted to a tuple of keys) will be deprecated, use a list instead. dff = df.groupby(contig)[depth_product, bases].sum() Now explicitly passes list, e.g.
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Codecov Report
@@ Coverage Diff @@
## dev #279 +/- ##
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Coverage 27.40% 27.40%
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Files 48 48
Lines 5469 5469
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Hits 1499 1499
Misses 3970 3970
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Update bedtools column summation to prevent emit of
FutureWarning:/home/evan/miniconda3/envs/autometa/lib/python3.9/site-packages/autometa/common/external/bedtools.py:107: FutureWarning: Indexing with multiple keys (implicitly converted to a tuple of keys) will be deprecated, use a list instead. dff = df.groupby(contig)[depth_product, bases].sum()Now explicitly passes list, e.g.
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