case-notebook

A notebook for clinical cases.

Jupyter Classical

Instructions to install Jupyter and Case Notebook in your machine:

PIP3 installation

sudo apt-get update
sudo apt-get install python3-pip

Jupyter installation

pip3 install jupyter

Jupyter will be installed in the following directory

~/.local/

Download the Git project in the following directory

~/git/case-notebook/

Libraries installation

SPARQLWrapper

pip3 install SPARQLWrapper

Widgets

pip3 install ipywidgets
sudo ~/.local/bin/jupyter nbextension enable --py widgetsnbextension

Kernel Gateway (for Python REST services)

pip3 install jupyter_kernel_gateway

Case-Notebook extension installation

cp -r ~/git/case-notebook/nbextensions/case-notebook ~/.local/share/jupyter/nbextensions
sudo ~/.local/bin/jupyter nbextension install ~/.local/share/jupyter/nbextensions/case-notebook/
sudo ~/.local/bin/jupyter nbextension enable case-notebook/main

Starting Jupyter

~/.local/bin/jupyter notebook