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ChIP-seq analyses with sliding windows

Environment Status
BioC-release Release OK
BioC-devel Devel OK

csaw uses sliding windows to detect differential binding in ChIP-seq data, This eliminates the need for a prior peak-calling step and the associated statistical issues like double-dipping. Check out the Bioconductor landing page for more details.

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Clone of the Bioconductor repository for the csaw package.

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