Add support for Torch ORT to Transformer based Tasks (#667)

* Add torch ORT support, move transformer Tasks to use general task class * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Fix import * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Update transformers version * Revert * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Revert * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add tests * Add tests * fix * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add docs for text classification and translation * Add note * Add CHANGELOG.md * Address code review * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Apply suggestions from code review Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Ethan Harris <ewah1g13@soton.ac.uk>
Lightning-Universe · Aug 17, 2021 · 741a838 · 741a838
1 parent 4e89a37
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -46,6 +46,8 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/).
 
 - Added instance segmentation task ([#608](https://github.com/PyTorchLightning/lightning-flash/pull/608))
 
+- Added Torch ORT support to Transformer based tasks ([#667](https://github.com/PyTorchLightning/lightning-flash/pull/667))
+
 ### Changed
 
 - Changed how pretrained flag works for loading weights for ImageClassifier task ([#560](https://github.com/PyTorchLightning/lightning-flash/pull/560))

diff --git a/docs/source/reference/summarization.rst b/docs/source/reference/summarization.rst
@@ -85,3 +85,21 @@ You can now perform inference from your client like this:
 .. literalinclude:: ../../../flash_examples/serve/summarization/client.py
     :language: python
     :lines: 14-
+
+------
+
+**********************************************
+Accelerate Training & Inference with Torch ORT
+**********************************************
+
+`Torch ORT <https://cloudblogs.microsoft.com/opensource/2021/07/13/accelerate-pytorch-training-with-torch-ort/>`__ converts your model into an optimized ONNX graph, speeding up training & inference when using NVIDIA or AMD GPUs. Enabling Torch ORT requires a single flag passed to the ``SummarizationTask`` once installed. See installation instructions `here <https://github.com/pytorch/ort#install-in-a-local-python-environment>`__.
+
+.. note::
+
+    Not all Transformer models are supported. See `this table <https://github.com/microsoft/onnxruntime-training-examples#examples>`__ for supported models + branches containing fixes for certain models.
+
+.. code-block:: python
+
+    ...
+
+    model = SummarizationTask(backbone="t5-large", num_classes=datamodule.num_classes, enable_ort=True)
diff --git a/docs/source/reference/text_classification.rst b/docs/source/reference/text_classification.rst
@@ -85,3 +85,21 @@ You can now perform inference from your client like this:
 .. literalinclude:: ../../../flash_examples/serve/text_classification/client.py
     :language: python
     :lines: 14-
+
+------
+
+**********************************************
+Accelerate Training & Inference with Torch ORT
+**********************************************
+
+`Torch ORT <https://cloudblogs.microsoft.com/opensource/2021/07/13/accelerate-pytorch-training-with-torch-ort/>`__ converts your model into an optimized ONNX graph, speeding up training & inference when using NVIDIA or AMD GPUs. Enabling Torch ORT requires a single flag passed to the ``TextClassifier`` once installed. See installation instructions `here <https://github.com/pytorch/ort#install-in-a-local-python-environment>`__.
+
+.. note::
+
+    Not all Transformer models are supported. See `this table <https://github.com/microsoft/onnxruntime-training-examples#examples>`__ for supported models + branches containing fixes for certain models.
+
+.. code-block:: python
+
+    ...
+
+    model = TextClassifier(backbone="facebook/bart-large", num_classes=datamodule.num_classes, enable_ort=True)
diff --git a/docs/source/reference/translation.rst b/docs/source/reference/translation.rst
@@ -85,3 +85,21 @@ You can now perform inference from your client like this:
 .. literalinclude:: ../../../flash_examples/serve/translation/client.py
     :language: python
     :lines: 14-
+
+------
+
+**********************************************
+Accelerate Training & Inference with Torch ORT
+**********************************************
+
+`Torch ORT <https://cloudblogs.microsoft.com/opensource/2021/07/13/accelerate-pytorch-training-with-torch-ort/>`__ converts your model into an optimized ONNX graph, speeding up training & inference when using NVIDIA or AMD GPUs. Enabling Torch ORT requires a single flag passed to the ``TranslationTask`` once installed. See installation instructions `here <https://github.com/pytorch/ort#install-in-a-local-python-environment>`__.
+
+.. note::
+
+    Not all Transformer models are supported. See `this table <https://github.com/microsoft/onnxruntime-training-examples#examples>`__ for supported models + branches containing fixes for certain models.
+
+.. code-block:: python
+
+    ...
+
+    model = TranslationTask(backbone="t5-large", num_classes=datamodule.num_classes, enable_ort=True)
diff --git a/flash/core/utilities/imports.py b/flash/core/utilities/imports.py
@@ -96,6 +96,7 @@ def _compare_version(package: str, op, version) -> bool:
 _SENTENCEPIECE_AVAILABLE = _module_available("sentencepiece")
 _DATASETS_AVAILABLE = _module_available("datasets")
 _ICEVISION_AVAILABLE = _module_available("icevision")
+_TORCH_ORT_AVAILABLE = _module_available("torch_ort")
 
 if Version:
     _TORCHVISION_GREATER_EQUAL_0_9 = _compare_version("torchvision", operator.ge, "0.9.0")

diff --git a/flash/text/classification/model.py b/flash/text/classification/model.py
@@ -16,15 +16,17 @@
 from typing import Any, Callable, Dict, List, Mapping, Optional, Sequence, Type, Union
 
 import torch
+from pytorch_lightning import Callback
 from torchmetrics import Metric
 
 from flash.core.classification import ClassificationTask, Labels
 from flash.core.data.process import Serializer
 from flash.core.utilities.imports import _TEXT_AVAILABLE
+from flash.text.ort_callback import ORTCallback
 
 if _TEXT_AVAILABLE:
-    from transformers import BertForSequenceClassification
-    from transformers.modeling_outputs import SequenceClassifierOutput
+    from transformers import AutoModelForSequenceClassification
+    from transformers.modeling_outputs import Seq2SeqSequenceClassifierOutput, SequenceClassifierOutput
 
 
 class TextClassifier(ClassificationTask):
@@ -43,6 +45,7 @@ class TextClassifier(ClassificationTask):
         learning_rate: Learning rate to use for training, defaults to `1e-3`
         multi_label: Whether the targets are multi-label or not.
         serializer: The :class:`~flash.core.data.process.Serializer` to use when serializing prediction outputs.
+        enable_ort: Enable Torch ONNX Runtime Optimization: https://onnxruntime.ai/docs/#onnx-runtime-for-training
     """
 
     required_extras: str = "text"
@@ -57,6 +60,7 @@ def __init__(
         learning_rate: float = 1e-2,
         multi_label: bool = False,
         serializer: Optional[Union[Serializer, Mapping[str, Serializer]]] = None,
+        enable_ort: bool = False,
     ):
         self.save_hyperparameters()
 
@@ -76,25 +80,24 @@ def __init__(
             multi_label=multi_label,
             serializer=serializer or Labels(multi_label=multi_label),
         )
-        self.model = BertForSequenceClassification.from_pretrained(backbone, num_labels=num_classes)
-
+        self.enable_ort = enable_ort
+        self.model = AutoModelForSequenceClassification.from_pretrained(backbone, num_labels=num_classes)
         self.save_hyperparameters()
 
     @property
     def backbone(self):
-        # see huggingface's BertForSequenceClassification
-        return self.model.bert
+        return self.model.base_model
 
     def forward(self, batch: Dict[str, torch.Tensor]):
         return self.model(input_ids=batch.get("input_ids", None), attention_mask=batch.get("attention_mask", None))
 
     def to_loss_format(self, x) -> torch.Tensor:
-        if isinstance(x, SequenceClassifierOutput):
+        if isinstance(x, (SequenceClassifierOutput, Seq2SeqSequenceClassifierOutput)):
             x = x.logits
         return super().to_loss_format(x)
 
     def to_metrics_format(self, x) -> torch.Tensor:
-        if isinstance(x, SequenceClassifierOutput):
+        if isinstance(x, (SequenceClassifierOutput, Seq2SeqSequenceClassifierOutput)):
             x = x.logits
         return super().to_metrics_format(x)
 
@@ -112,3 +115,9 @@ def _ci_benchmark_fn(self, history: List[Dict[str, Any]]):
             assert history[-1]["val_f1"] > 0.40, history[-1]["val_f1"]
         else:
             assert history[-1]["val_accuracy"] > 0.70, history[-1]["val_accuracy"]
+
+    def configure_callbacks(self) -> List[Callback]:
+        callbacks = super().configure_callbacks() or []
+        if self.enable_ort:
+            callbacks.append(ORTCallback())
+        return callbacks
diff --git a/flash/text/ort_callback.py b/flash/text/ort_callback.py
@@ -0,0 +1,52 @@
+# Copyright The PyTorch Lightning team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+from pytorch_lightning import Callback, LightningModule
+from pytorch_lightning.utilities.exceptions import MisconfigurationException
+
+from flash import Trainer
+from flash.core.utilities.imports import _TORCH_ORT_AVAILABLE
+
+if _TORCH_ORT_AVAILABLE:
+    from torch_ort import ORTModule
+
+
+class ORTCallback(Callback):
+    """Enables Torch ORT: Accelerate PyTorch models with ONNX Runtime.
+
+    Wraps a model with the ORT wrapper, lazily converting your module into an ONNX export, to optimize for
+    training and inference.
+
+    Usage:
+
+        # via Transformer Tasks
+        model = TextClassifier(backbone="facebook/bart-large", num_classes=datamodule.num_classes, enable_ort=True)
+
+        # or via the trainer
+        trainer = flash.Trainer(callbacks=ORTCallback())
+    """
+
+    def __init__(self):
+        if not _TORCH_ORT_AVAILABLE:
+            raise MisconfigurationException(
+                "Torch ORT is required to use ORT. See here for installation: https://github.com/pytorch/ort"
+            )
+
+    def on_before_accelerator_backend_setup(self, trainer: Trainer, pl_module: LightningModule) -> None:
+        if not hasattr(pl_module, "model"):
+            raise MisconfigurationException(
+                "Torch ORT requires to wrap a single model that defines a forward function "
+                "assigned as `model` inside the `LightningModule`."
+            )
+        if not isinstance(pl_module.model, ORTModule):
+            pl_module.model = ORTModule(pl_module.model)
diff --git a/flash/text/seq2seq/core/model.py b/flash/text/seq2seq/core/model.py
@@ -16,13 +16,15 @@
 from typing import Any, Callable, List, Mapping, Optional, Sequence, Type, Union
 
 import torch
+from pytorch_lightning import Callback
 from pytorch_lightning.utilities import rank_zero_info
 from torch import Tensor
 from torchmetrics import Metric
 
 from flash.core.finetuning import FlashBaseFinetuning
 from flash.core.model import Task
 from flash.core.utilities.imports import _TEXT_AVAILABLE
+from flash.text.ort_callback import ORTCallback
 from flash.text.seq2seq.core.finetuning import Seq2SeqFreezeEmbeddings
 
 if _TEXT_AVAILABLE:
@@ -54,6 +56,7 @@ class Seq2SeqTask(Task):
         learning_rate: Learning rate to use for training, defaults to `3e-4`
         val_target_max_length: Maximum length of targets in validation. Defaults to `128`
         num_beams: Number of beams to use in validation when generating predictions. Defaults to `4`
+        enable_ort: Enable Torch ONNX Runtime Optimization: https://onnxruntime.ai/docs/#onnx-runtime-for-training
     """
 
     required_extras: str = "text"
@@ -67,6 +70,7 @@ def __init__(
         learning_rate: float = 5e-5,
         val_target_max_length: Optional[int] = None,
         num_beams: Optional[int] = None,
+        enable_ort: bool = False,
     ):
         os.environ["TOKENIZERS_PARALLELISM"] = "TRUE"
         # disable HF thousand warnings
@@ -75,6 +79,7 @@ def __init__(
         os.environ["PYTHONWARNINGS"] = "ignore"
         super().__init__(loss_fn=loss_fn, optimizer=optimizer, metrics=metrics, learning_rate=learning_rate)
         self.model = AutoModelForSeq2SeqLM.from_pretrained(backbone)
+        self.enable_ort = enable_ort
         self.val_target_max_length = val_target_max_length
         self.num_beams = num_beams
         self._initialize_model_specific_parameters()
@@ -134,3 +139,9 @@ def tokenize_labels(self, labels: Tensor) -> List[str]:
 
     def configure_finetune_callback(self) -> List[FlashBaseFinetuning]:
         return [Seq2SeqFreezeEmbeddings(self.model.config.model_type, train_bn=True)]
+
+    def configure_callbacks(self) -> List[Callback]:
+        callbacks = super().configure_callbacks() or []
+        if self.enable_ort:
+            callbacks.append(ORTCallback())
+        return callbacks
diff --git a/flash/text/seq2seq/question_answering/model.py b/flash/text/seq2seq/question_answering/model.py
@@ -42,6 +42,7 @@ class QuestionAnsweringTask(Seq2SeqTask):
         num_beams: Number of beams to use in validation when generating predictions. Defaults to `4`
         use_stemmer: Whether Porter stemmer should be used to strip word suffixes to improve matching.
         rouge_newline_sep: Add a new line at the beginning of each sentence in Rouge Metric calculation.
+        enable_ort: Enable Torch ONNX Runtime Optimization: https://onnxruntime.ai/docs/#onnx-runtime-for-training
     """
 
     def __init__(
@@ -55,6 +56,7 @@ def __init__(
         num_beams: Optional[int] = 4,
         use_stemmer: bool = True,
         rouge_newline_sep: bool = True,
+        enable_ort: bool = False,
     ):
         self.save_hyperparameters()
         super().__init__(
@@ -65,6 +67,7 @@ def __init__(
             learning_rate=learning_rate,
             val_target_max_length=val_target_max_length,
             num_beams=num_beams,
+            enable_ort=enable_ort,
         )
         self.rouge = RougeMetric(
             rouge_newline_sep=rouge_newline_sep,

diff --git a/flash/text/seq2seq/summarization/model.py b/flash/text/seq2seq/summarization/model.py
@@ -42,6 +42,7 @@ class SummarizationTask(Seq2SeqTask):
         num_beams: Number of beams to use in validation when generating predictions. Defaults to `4`
         use_stemmer: Whether Porter stemmer should be used to strip word suffixes to improve matching.
         rouge_newline_sep: Add a new line at the beginning of each sentence in Rouge Metric calculation.
+        enable_ort: Enable Torch ONNX Runtime Optimization: https://onnxruntime.ai/docs/#onnx-runtime-for-training
     """
 
     def __init__(
@@ -55,6 +56,7 @@ def __init__(
         num_beams: Optional[int] = 4,
         use_stemmer: bool = True,
         rouge_newline_sep: bool = True,
+        enable_ort: bool = False,
     ):
         self.save_hyperparameters()
         super().__init__(
@@ -65,6 +67,7 @@ def __init__(
             learning_rate=learning_rate,
             val_target_max_length=val_target_max_length,
             num_beams=num_beams,
+            enable_ort=enable_ort,
         )
         self.rouge = RougeMetric(
             rouge_newline_sep=rouge_newline_sep,

diff --git a/flash/text/seq2seq/translation/model.py b/flash/text/seq2seq/translation/model.py
@@ -42,6 +42,7 @@ class TranslationTask(Seq2SeqTask):
         num_beams: Number of beams to use in validation when generating predictions. Defaults to `4`
         n_gram: Maximum n_grams to use in metric calculation. Defaults to `4`
         smooth: Apply smoothing in BLEU calculation. Defaults to `True`
+        enable_ort: Enable Torch ONNX Runtime Optimization: https://onnxruntime.ai/docs/#onnx-runtime-for-training
     """
 
     def __init__(
@@ -55,6 +56,7 @@ def __init__(
         num_beams: Optional[int] = 4,
         n_gram: bool = 4,
         smooth: bool = True,
+        enable_ort: bool = False,
     ):
         self.save_hyperparameters()
         super().__init__(
@@ -65,6 +67,7 @@ def __init__(
             learning_rate=learning_rate,
             val_target_max_length=val_target_max_length,
             num_beams=num_beams,
+            enable_ort=enable_ort,
         )
         self.bleu = BLEUScore(
             n_gram=n_gram,

diff --git a/tests/text/classification/test_ort.py b/tests/text/classification/test_ort.py
@@ -0,0 +1,62 @@
+# Copyright The PyTorch Lightning team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+import os
+
+import pytest
+import torch
+from pytorch_lightning import Callback
+from pytorch_lightning.core.lightning import LightningModule
+from pytorch_lightning.utilities.exceptions import MisconfigurationException
+
+from flash import Trainer
+from flash.core.utilities.imports import _TORCH_ORT_AVAILABLE
+from flash.text import TextClassifier
+from flash.text.ort_callback import ORTCallback
+from tests.helpers.boring_model import BoringModel
+from tests.helpers.utils import _TEXT_TESTING
+from tests.text.classification.test_model import DummyDataset, TEST_BACKBONE
+
+if _TORCH_ORT_AVAILABLE:
+    from torch_ort import ORTModule
+
+
+@pytest.mark.skipif(os.name == "nt", reason="Huggingface timing out on Windows")
+@pytest.mark.skipif(not _TEXT_TESTING, reason="text libraries aren't installed.")
+@pytest.mark.skipif(not _TORCH_ORT_AVAILABLE, reason="ORT Module aren't installed.")
+def test_init_train_enable_ort(tmpdir):
+    class TestCallback(Callback):
+        def on_train_start(self, trainer: Trainer, pl_module: LightningModule) -> None:
+            assert isinstance(pl_module.model, ORTModule)
+
+    model = TextClassifier(2, TEST_BACKBONE, enable_ort=True)
+    trainer = Trainer(default_root_dir=tmpdir, fast_dev_run=True, callbacks=TestCallback())
+    trainer.fit(
+        model,
+        train_dataloader=torch.utils.data.DataLoader(DummyDataset()),
+        val_dataloaders=torch.utils.data.DataLoader(DummyDataset()),
+    )
+    trainer.test(model, test_dataloaders=torch.utils.data.DataLoader(DummyDataset()))
+
+
+@pytest.mark.skipif(os.name == "nt", reason="Huggingface timing out on Windows")
+@pytest.mark.skipif(not _TORCH_ORT_AVAILABLE, reason="ORT Module aren't installed.")
+def test_ort_callback_fails_no_model(tmpdir):
+    model = BoringModel()
+    trainer = Trainer(default_root_dir=tmpdir, fast_dev_run=True, callbacks=ORTCallback())
+    with pytest.raises(MisconfigurationException, match="Torch ORT requires to wrap a single model"):
+        trainer.fit(
+            model,
+            train_dataloader=torch.utils.data.DataLoader(DummyDataset()),
+            val_dataloaders=torch.utils.data.DataLoader(DummyDataset()),
+        )