Skip to content
@LooseLab

LooseLab

The LooseLab is based in the University of Nottingham's school of life sciences.

Popular repositories Loading

  1. readfish readfish Public

    CLI tool for flexible and fast adaptive sampling on ONT sequencers

    Python 167 31

  2. bulkvis bulkvis Public

    Python 46 8

  3. minotourapp minotourapp Public

    Minotour API, web and client code

    JavaScript 28 1

  4. Icarust Icarust Public

    A fully featured MinKNOW simulator for testing read until experiments.

    Rust 15 5

  5. read_until_api_v2 read_until_api_v2 Public archive

    Python3 Read Until API implementation

    Python 11 1

  6. minotourcli minotourcli Public

    Python 10 1

Repositories

Showing 10 of 34 repositories
  • LIFE4138 Public

    teaching materials for life4138

    LooseLab/LIFE4138’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Sep 7, 2024
  • readfish Public

    CLI tool for flexible and fast adaptive sampling on ONT sequencers

    LooseLab/readfish’s past year of commit activity
    Python 167 GPL-3.0 31 16 (2 issues need help) 1 Updated Aug 27, 2024
  • CNV_gene_plot Public

    A tool to generate CNV plots with the ability to plot GOIs from a bed file.

    LooseLab/CNV_gene_plot’s past year of commit activity
    Python 0 0 1 0 Updated Aug 7, 2024
  • barcode_paper_nb Public

    Companion repo for https://www.biorxiv.org/content/10.1101/2021.12.01.470722v1

    LooseLab/barcode_paper_nb’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 1, 2024
  • Icarust Public

    A fully featured MinKNOW simulator for testing read until experiments.

    LooseLab/Icarust’s past year of commit activity
    Rust 15 MPL-2.0 5 7 0 Updated Jul 10, 2024
  • minotourcli Public
    LooseLab/minotourcli’s past year of commit activity
    Python 10 MIT 1 10 2 Updated Jul 2, 2024
  • ROBIN_cnv_object Public
    LooseLab/ROBIN_cnv_object’s past year of commit activity
    Python 0 0 0 0 Updated Jul 2, 2024
  • Icarust_supplementary_data Public

    Supplementary data for the corrsponding Icarust paper. See README.md for layout of files.

    LooseLab/Icarust_supplementary_data’s past year of commit activity
    Jupyter Notebook 0 MPL-2.0 0 0 0 Updated Jun 20, 2024
  • sturgeon Public Forked from marcpaga/sturgeon

    Sturgeon is a CNS neural network classifier

    LooseLab/sturgeon’s past year of commit activity
    Python 0 8 0 0 Updated May 7, 2024
  • rftools Public

    Tools for post processing readfish data

    LooseLab/rftools’s past year of commit activity
    Rust 1 MIT 0 4 0 Updated Feb 9, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…