GitHub - MASILab/DAPI

Name		Name	Last commit message	Last commit date
Latest commit History 41 Commits
Figures_for_Paper		Figures_for_Paper
R_Codes		R_Codes
Trial_Metrics		Trial_Metrics
__pycache__		__pycache__
cell_classification		cell_classification
dapi_utils		dapi_utils
debugging_codes		debugging_codes
plot_codes		plot_codes
unet_segmentation		unet_segmentation
vxl_morph		vxl_morph
001_data_QA.py		001_data_QA.py
ants_reg.py		ants_reg.py
calculate_all_metrics.ipynb		calculate_all_metrics.ipynb
calculate_metrics.ipynb		calculate_metrics.ipynb
check_registration.ipynb		check_registration.ipynb
create_mask.py		create_mask.py
create_masks_latest_version.ipynb		create_masks_latest_version.ipynb
create_maskv.py		create_maskv.py
discard.csv		discard.csv
final_metricsoutput_version2_masked.csv		final_metricsoutput_version2_masked.csv
final_metricsoutput_version2_unmasked.csv		final_metricsoutput_version2_unmasked.csv
metrics.py		metrics.py
mi_pytorch.py		mi_pytorch.py
ncc.py		ncc.py
ncc_gpu.py		ncc_gpu.py
ncc_pytorch.py		ncc_pytorch.py
orig_files.csv		orig_files.csv
plots.ipynb		plots.ipynb
registration.ipynb		registration.ipynb
registration.py		registration.py
registration_server.py		registration_server.py
run_deepcell_modified.sh		run_deepcell_modified.sh
test_metrics.py		test_metrics.py
visualise_checkerboard.ipynb		visualise_checkerboard.ipynb