Customisable genomic DST

This is a significant update to tbtAMR. It allows users to use default settings, based on WHO v2 catalogue or supply their own.

• Use a custom database
• Add database configuration details to a json file
• Add interpretative criteria to allow for customised reporting and inferrence of resistance.
• Cascade reporting structure which allows for generation of reports that only contain results required/reportable

a new 'tAMR team member

tbtAMR is a small tool that implements TB-Profiler to report genomic DST for M. tuberculosis in a clinical and public health laboratory.