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Ignore iternums which only have pickup files #81

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Ignore iternums which only have pickup files #81

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833c935
Ignore iterations which only have pickup files.
knaughten Jun 8, 2018
f4e5ff4
Reinstated an accidentally deleted comment
knaughten Jun 8, 2018
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5 changes: 4 additions & 1 deletion xmitgcm/mds_store.py
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Original file line number Diff line number Diff line change
Expand Up @@ -750,7 +750,7 @@ def _concat_dicts(list_of_dicts):


def _get_all_iternums(data_dir, file_prefixes=None,
file_format='*.??????????.data'):
file_format='*.??????????.data', ignore_pickup=True):
"""Scan a directory for all iteration number suffixes."""
iternums = set()
all_datafiles = glob(os.path.join(data_dir, file_format))
Expand All @@ -759,6 +759,9 @@ def _get_all_iternums(data_dir, file_prefixes=None,
for f in all_datafiles:
iternum = int(f[istart:iend])
prefix = os.path.split(f[:istart-1])[-1]
# Only process iternums which have something more than pickups
if ignore_pickup and _is_pickup_prefix(prefix):
continue
if file_prefixes is None:
iternums.add(iternum)
else:
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