PhosphoView : MSc Bioinformatics Software Development Group Project

PhosphoView is a web application that can be used to explore background information about human protein kinases and the sites they phosphorylate. It is capable of calculating the level of activity of each human kinase from experimental datasets uploaded by the user.

Deployed Web Application

http://phosphoview-docker.xfqyhkzn9j.us-east-2.elasticbeanstalk.com

Running PhosphoView locally

To install PhosphoView, follow these steps:

1. Git clone https://github.com/MO105/DreamTeam
2. cd DreamTeam/app
3. pip install -r requirements.txt

Linux and macOS:

1. export FLASK_APP=app.py
2. flask run

Windows:

1. set FLASK_APP=app.py 
2. flask run

Application runs on localhost:5000

Contributors

Thanks to the following people who have contributed to this project:

• Anastasia
• Alisha
• Han 🐛
• Mohamed
• Sheridan

Acknowledgments

We would like to thank Professor Conrad Bessant and Dr Fabrizio Smeraldi for their continued support throughout this group project.