Merge pull request #96 from kephale/spdx-license-headers

Switch to SPDX-License-Identifiers
MPI-Dortmund · Feb 23, 2024 · 3c9cb5e · 3c9cb5e
2 parents 2f12e79 + cd4a004
commit 3c9cb5e
Show file tree

Hide file tree

Showing 52 changed files with 364 additions and 19,292 deletions.
diff --git a/scripts/train_optuna.py b/scripts/train_optuna.py
diff --git a/tomotwin/embed_main.py b/tomotwin/embed_main.py
diff --git a/tomotwin/locate_main.py b/tomotwin/locate_main.py
diff --git a/tomotwin/map_main.py b/tomotwin/map_main.py
diff --git a/tomotwin/modules/common/distances.py b/tomotwin/modules/common/distances.py
diff --git a/tomotwin/modules/common/exceptions.py b/tomotwin/modules/common/exceptions.py
diff --git a/tomotwin/modules/common/findmax/findmax.py b/tomotwin/modules/common/findmax/findmax.py
diff --git a/tomotwin/modules/common/io/mrc_format.py b/tomotwin/modules/common/io/mrc_format.py
diff --git a/tomotwin/modules/common/preprocess.py b/tomotwin/modules/common/preprocess.py
diff --git a/tomotwin/modules/inference/argparse_embed_ui.py b/tomotwin/modules/inference/argparse_embed_ui.py
diff --git a/tomotwin/modules/inference/argparse_locate_ui.py b/tomotwin/modules/inference/argparse_locate_ui.py
diff --git a/tomotwin/modules/inference/argparse_map_ui.py b/tomotwin/modules/inference/argparse_map_ui.py
diff --git a/tomotwin/modules/inference/argparse_pick_ui.py b/tomotwin/modules/inference/argparse_pick_ui.py
diff --git a/tomotwin/modules/inference/boxer.py b/tomotwin/modules/inference/boxer.py
diff --git a/tomotwin/modules/inference/distance_mapper.py b/tomotwin/modules/inference/distance_mapper.py
diff --git a/tomotwin/modules/inference/embed_ui.py b/tomotwin/modules/inference/embed_ui.py
diff --git a/tomotwin/modules/inference/embedor.py b/tomotwin/modules/inference/embedor.py
diff --git a/tomotwin/modules/inference/findmaxima_locator.py b/tomotwin/modules/inference/findmaxima_locator.py
diff --git a/tomotwin/modules/inference/locate_ui.py b/tomotwin/modules/inference/locate_ui.py
diff --git a/tomotwin/modules/inference/locator.py b/tomotwin/modules/inference/locator.py
diff --git a/tomotwin/modules/inference/map_ui.py b/tomotwin/modules/inference/map_ui.py
diff --git a/tomotwin/modules/inference/mapper.py b/tomotwin/modules/inference/mapper.py
diff --git a/tomotwin/modules/inference/pick_ui.py b/tomotwin/modules/inference/pick_ui.py
diff --git a/tomotwin/modules/inference/reference_refinement.py b/tomotwin/modules/inference/reference_refinement.py
diff --git a/tomotwin/modules/inference/volumedata.py b/tomotwin/modules/inference/volumedata.py
diff --git a/tomotwin/modules/networks/GeneralizedMeanPooling.py b/tomotwin/modules/networks/GeneralizedMeanPooling.py
diff --git a/tomotwin/modules/networks/SiameseNet3D.py b/tomotwin/modules/networks/SiameseNet3D.py
diff --git a/tomotwin/modules/networks/networkmanager.py b/tomotwin/modules/networks/networkmanager.py
diff --git a/tomotwin/modules/networks/resnet.py b/tomotwin/modules/networks/resnet.py
diff --git a/tomotwin/modules/networks/torchmodel.py b/tomotwin/modules/networks/torchmodel.py
diff --git a/tomotwin/modules/tools/embedding_mask.py b/tomotwin/modules/tools/embedding_mask.py
diff --git a/tomotwin/modules/tools/extract_reference.py b/tomotwin/modules/tools/extract_reference.py
diff --git a/tomotwin/modules/tools/make_target.py b/tomotwin/modules/tools/make_target.py
diff --git a/tomotwin/modules/tools/scale_coordinates.py b/tomotwin/modules/tools/scale_coordinates.py
diff --git a/tomotwin/modules/tools/tomotwintool.py b/tomotwin/modules/tools/tomotwintool.py
diff --git a/tomotwin/modules/training/LossPyML.py b/tomotwin/modules/training/LossPyML.py
diff --git a/tomotwin/modules/training/argparse_ui.py b/tomotwin/modules/training/argparse_ui.py
diff --git a/tomotwin/modules/training/filenamematchingtripletprovidernopdb.py b/tomotwin/modules/training/filenamematchingtripletprovidernopdb.py
diff --git a/tomotwin/modules/training/filenametripletprovider.py b/tomotwin/modules/training/filenametripletprovider.py
diff --git a/tomotwin/modules/training/filepathtriplet.py b/tomotwin/modules/training/filepathtriplet.py
diff --git a/tomotwin/modules/training/mrctriplethandler.py b/tomotwin/modules/training/mrctriplethandler.py
diff --git a/tomotwin/modules/training/numpytriplet.py b/tomotwin/modules/training/numpytriplet.py
diff --git a/tomotwin/modules/training/torchtrainer.py b/tomotwin/modules/training/torchtrainer.py
diff --git a/tomotwin/modules/training/trainer.py b/tomotwin/modules/training/trainer.py
diff --git a/tomotwin/modules/training/training_ui.py b/tomotwin/modules/training/training_ui.py
diff --git a/tomotwin/modules/training/transforms.py b/tomotwin/modules/training/transforms.py
diff --git a/tomotwin/modules/training/tripletdataset.py b/tomotwin/modules/training/tripletdataset.py
diff --git a/tomotwin/modules/training/triplethandler.py b/tomotwin/modules/training/triplethandler.py
diff --git a/tomotwin/modules/training/tripletprovider.py b/tomotwin/modules/training/tripletprovider.py
diff --git a/tomotwin/pick_main.py b/tomotwin/pick_main.py
diff --git a/tomotwin/tools_main.py b/tomotwin/tools_main.py
diff --git a/tomotwin/train_main.py b/tomotwin/train_main.py